ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_147250_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 28100..29611

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1R4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 503.0
  • Bit_score: 896
  • Evalue 7.20e-258
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC58299.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 503.0
  • Bit_score: 914
  • Evalue 4.70e-263
dipeptide ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 499.0
  • Bit_score: 528
  • Evalue 1.90e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGCTTCGCCGCACCTCCGTCGCCGCGGCCGCGCTCATCGCGGCCGGCGCCCTGCTGCTCAGCGCCTGCTCCGGCGGCGCCGCCCCCGACACCTCGGCCTCCGCGGTCACGCCCGACCCCGACGCCGTCGTGACGGTGCGTTTGGTCTCCGAGCCGAGCAACCTCGACATCCGTGAGACGGCCGGCGCCGCGCTCGACCAGATCCTCATCGACAACGTGTACCAGGGGCTCGTCTCCCGCACGCCCGACCAGCAGATCGAGCCGGCGTTGGCCAGCAGCTACGACGTCTCCGGCGACGGCCTCACCTACACGTTCACCCTCCGCGAGGGGGTGAGCTTCCACGACGGCTCGCCCCTCACGCCCGAGGACGTCGTCTGGTCGCTCCAGCAGGTGAAGGACAACGCCGCCTACCGCGACTCCGAGCGCCTCGCACGCGTGCAGACGATGGCCGCGAACGGCCAGGACATCGTCCTCACCCTCAGCGAGCCCGACTCGAGCCTGCTGTGGAACCTCACCGGCCGCGCCGGCCTCGTCCTGAAGAAGGACGACACCACCGACCGCAAGACGAAGGCCAACGGCACCGGTCCGTTCACCCTCGCGAACTGGAAGCAGGGCGATTCGATCACCTTCGACCGCAACGACGCCTACTGGGGCGACAAGGCCAAGGCGAAGGAGGTCGTCTTCGACTACATCCCCGACAACCAGGCGGCCCTCAACGGCGCTCTCGCCCACGAGCTCGACGTCGTCACCGGCTTCGACGCGAACCTCAAGGACCAGGTCGAGGCGAACGGCGACTTCGCGCTCGTGCTCGGCAAGTCCACCGACAAGGGCACGCTCGCGATGAATGCGACGAAGGCCCCGCTGTCCGACAAGCGCGTGCGCCAGGCCATCCGCCAGGCCATCGACCACGACGCCATCGTGAAGGCGCTGGGTGCGGGCCAGACCCTCTACGGCCCCATCCCCGAGCTCGACCCCGGCTACGAGGACCTCTCGTCGACGGCGCCGTTCGATCCGGATGCCGCGAAGAAGCTGCTCGCGGAGGCGGGCGTGAGCGATCTCACGCTGACCCTCACGATCCCCTCGTTCTACGGGACGACGGTGTCGCAGATCCTCGTGTCGAACCTCAACGACGTGGGCATCACGCTCAAGGTGAAGGCCGTCGAGTTCCCGACGTGGCTCAACGACGTCTACATCAACAAGAACTACGACCTCAGCTTCGTCCTGCACACCGAGGCGCGTGACTTCGAGAACTGGGCGAACCCGGACTACTACTTCACCTACGACAACGCCGAGGTGCAGAAGCTCTACCAGCAGTCGCTCAGCGCGACCGACGAGCAGACCTCCGCCGACCTGCTGAAGAAGGCCGCGAAGATCGTCGCCGACGACCAGGCCGCCGACTGGCTGTACAACGGCGCCTCGGTCGTCGCGGTCGCCACCAACGTGAGCGGCTTCCCCTCGGTCAACGTCAACGAGCGCATCGACCTCGCCGAACTGGCCAAGAGCAAGGGGTGA
PROTEIN sequence
Length: 504
MLRRTSVAAAALIAAGALLLSACSGGAAPDTSASAVTPDPDAVVTVRLVSEPSNLDIRETAGAALDQILIDNVYQGLVSRTPDQQIEPALASSYDVSGDGLTYTFTLREGVSFHDGSPLTPEDVVWSLQQVKDNAAYRDSERLARVQTMAANGQDIVLTLSEPDSSLLWNLTGRAGLVLKKDDTTDRKTKANGTGPFTLANWKQGDSITFDRNDAYWGDKAKAKEVVFDYIPDNQAALNGALAHELDVVTGFDANLKDQVEANGDFALVLGKSTDKGTLAMNATKAPLSDKRVRQAIRQAIDHDAIVKALGAGQTLYGPIPELDPGYEDLSSTAPFDPDAAKKLLAEAGVSDLTLTLTIPSFYGTTVSQILVSNLNDVGITLKVKAVEFPTWLNDVYINKNYDLSFVLHTEARDFENWANPDYYFTYDNAEVQKLYQQSLSATDEQTSADLLKKAAKIVADDQAADWLYNGASVVAVATNVSGFPSVNVNERIDLAELAKSKG*