ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_144812_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17677..18384)

Top 3 Functional Annotations

Value Algorithm Source
Iron dependent repressor n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5V7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 235.0
  • Bit_score: 450
  • Evalue 8.30e-124
DtxR family transcriptional regulator {ECO:0000313|EMBL:EXJ50948.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 235.0
  • Bit_score: 451
  • Evalue 5.30e-124
Mn-dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 230.0
  • Bit_score: 397
  • Evalue 2.40e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGACCGATCTGATCGACACCACCGAGATGTACCTGCGTACGATCCTCGAGCTCGAGGAGGAGGGCATCGTCCCCCTGCGTGCGCGCATCTCCGAGCGCCTCGGGCACTCCGGGCCCACGGTGTCGCAGACGGTGGGACGCATGGAGCGCGACGGCCTCGTGGTCGTCTCCGACGACCGCTCGCTCGAGCTGACCATCACCGGCCGGCAGAAGGCGGTGGACGTGATGCGCAAGCACCGCCTCGCCGAGCGCCTGCTGAGCGATGTGATCGGCCTGGACTGGGCCTACGTCCACGAAGAGGCCTGCCGCTGGGAGCACGTGATGAGCGAGCTGGTCGAGCGCCGGCTCATCGAGCTGCTCGGTCACCCCACCGAATCGCCCTACGGCAACCCGATCCCCGGGCTGGACCAGCTGGGCGACGTGCCGGCGCGCACCTTCCACGACGGGGTCGTCGGCCTGGTGCGGCTGCTCAACGAGACCGGCGGGCCCGTCAGCGGGACCGTGCGCCGACTCGCGGAGCCGGTGCAGGTCGACCCCGAGCTGCTCGACCAGCTGCGCGACGCGGGCGTGGTGCCGGGCGGGGTCGGAGAGTTCCGTTTCAGCGAGGGCTACGTGCTCGTCCAGATGGCCGGCAAGCCCGACGGACTCGAGCTGCCGGTCGAGGTCGCCTCGCACATCTTCCTCGTCGACGCGGTCCCGCAAGCCTGA
PROTEIN sequence
Length: 236
MTDLIDTTEMYLRTILELEEEGIVPLRARISERLGHSGPTVSQTVGRMERDGLVVVSDDRSLELTITGRQKAVDVMRKHRLAERLLSDVIGLDWAYVHEEACRWEHVMSELVERRLIELLGHPTESPYGNPIPGLDQLGDVPARTFHDGVVGLVRLLNETGGPVSGTVRRLAEPVQVDPELLDQLRDAGVVPGGVGEFRFSEGYVLVQMAGKPDGLELPVEVASHIFLVDAVPQA*