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berkeley_reactor_200306_planktonic_scaffold_144812

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_144812_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1028)
DNA (1026bp) protein (342aa)
UMUC domain protein DNA-repair protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5U0_9MICO
UMUC domain protein DNA-repair protein {ECO:0000313|EMBL:EIC07537.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
nucleotidyltransferase/DNA polymerase
berkeley_reactor_200306_planktonic_scaffold_144812_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1030..1731)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B951_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85139.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1890..3242
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7L9_9MICO
Hydroxyatrazine ethylaminohydrolase {ECO:0000313|EMBL:KIC60095.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hydroxyatrazine ethylaminohydrolase
berkeley_reactor_200306_planktonic_scaffold_144812_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3634..4638)
DNA (1005bp) protein (335aa)
Ferredoxin n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5U3_9MICO
Ferredoxin {ECO:0000313|EMBL:EIC07540.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
pobB; phenoxybenzoate dioxygenase subunit beta
berkeley_reactor_200306_planktonic_scaffold_144812_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4859..6139
DNA (1281bp) protein (427aa)
Amidohydrolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5U4_9MICO
Amidohydrolase {ECO:0000313|EMBL:EIC07541.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
codA; cytosine deaminase
berkeley_reactor_200306_planktonic_scaffold_144812_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6136..6936
DNA (801bp) protein (267aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5U5_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC07542.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC transporter
berkeley_reactor_200306_planktonic_scaffold_144812_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6933..7877
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B946_9MICO
Nitrate ABC transporter permease {ECO:0000313|EMBL:KIC60091.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
binding-protein-dependent transport system inner membrane protein
berkeley_reactor_200306_planktonic_scaffold_144812_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7975..9180
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E5U7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60090.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9247..9855)
DNA (609bp) protein (203aa)
Formiminotransferase-cyclodeaminase n=2 Tax=Microbacterium RepID=H8E5U8_9MICO
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:KIC60089.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
methenyltetrahydrofolate cyclohydrolase
berkeley_reactor_200306_planktonic_scaffold_144812_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10019..11152
DNA (1134bp) protein (378aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5U9_9MICO
berkeley_reactor_200306_planktonic_scaffold_144812_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11149..12213
DNA (1065bp) protein (355aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Methylenetetrahydrofolate reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEM3_9MICO
5,10-methylenetetrahydrofolate reductase
berkeley_reactor_200306_planktonic_scaffold_144812_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12219..12842)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=S3B942_9MICO
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:KIC60086.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12877..14250
DNA (1374bp) protein (458aa)
FAD linked oxidase domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5V2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85128.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
FAD/FMN-dependent dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_144812_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14247..15050
DNA (804bp) protein (268aa)
Creatininase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5V3_9MICO
Creatininase {ECO:0000313|EMBL:EIC07550.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
amidase
berkeley_reactor_200306_planktonic_scaffold_144812_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15047..15703
DNA (657bp) protein (219aa)
pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxamine 5-phosphate oxidase-related FMN-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5V4_9MICO
Pyridoxamine 5-phosphate oxidase {ECO:0000313|EMBL:KIC60083.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_144812_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15710..16207)
DNA (498bp) protein (166aa)
HNH endonuclease n=2 Tax=Microbacterium RepID=H8E5V5_9MICO
HNH endonuclease {ECO:0000313|EMBL:EIC07552.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
restriction endonuclease
berkeley_reactor_200306_planktonic_scaffold_144812_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16554..17447)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B937_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85124.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17677..18384)
DNA (708bp) protein (236aa)
Iron dependent repressor n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5V7_9MICO
DtxR family transcriptional regulator {ECO:0000313|EMBL:EXJ50948.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Mn-dependent transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_144812_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18486..19604
DNA (1119bp) protein (373aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Phosphoserine aminotransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASL3_9MICO
serC; phosphoserine aminotransferase
berkeley_reactor_200306_planktonic_scaffold_144812_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19670..20269)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5W0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07557.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_21
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20253..20636)
DNA (384bp) protein (128aa)
Cold-shock protein DNA-binding protein n=2 Tax=Microbacterium RepID=H8E5W1_9MICO
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:EIC07558.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
cold shock proteins
berkeley_reactor_200306_planktonic_scaffold_144812_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20758..21048
DNA (291bp) protein (97aa)
Multidrug ABC transporter ATPase/permease n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5W2_9MICO
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EXJ52369.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
multidrug ABC transporter ATPase/permease
berkeley_reactor_200306_planktonic_scaffold_144812_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21050..22801
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7J8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07560.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22872..24515
DNA (1644bp) protein (548aa)
DNA excision repair protein ERCC-3 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASK7_9MICO
DNA excision repair protein ERCC-3 {ECO:0000313|EMBL:EPD85117.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
xpbC; DNA or RNA helicase of superfamily II
berkeley_reactor_200306_planktonic_scaffold_144812_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24726..25754)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9G5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52367.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_26
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25812..26504
DNA (693bp) protein (231aa)
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E5W6_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC60073.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
phoP; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
berkeley_reactor_200306_planktonic_scaffold_144812_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26515..28239
DNA (1725bp) protein (575aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B926_9MICO
signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_144812_28
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28356..28643
DNA (288bp) protein (96aa)
WXG100 family type VII secretion target n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7J2_9MICO
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28704..30323)
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=2 Tax=Microbacterium RepID=H8E5W9_9MICO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
groEL; chaperonin GroEL
berkeley_reactor_200306_planktonic_scaffold_144812_30
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30492..30695)
DNA (204bp) protein (68aa)
Cold-shock protein DNA-binding protein n=2 Tax=Microbacterium RepID=H8E5X0_9MICO
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:EIC07567.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scoF4; cold shock proteins
Displaying items 1-30 of 77 in total

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