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berkeley_reactor_200306_planktonic_scaffold_144812_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20253..20636)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein n=2 Tax=Microbacterium RepID=H8E5W1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 127.0
  • Bit_score: 254
  • Evalue 3.60e-65
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:EIC07558.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 127.0
  • Bit_score: 254
  • Evalue 5.10e-65
cold shock proteins similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 127.0
  • Bit_score: 202
  • Evalue 4.60e-50

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGCCCACCGGCAAGGTCAGGTTCTACGACGACGAGAAGGGGTTCGGCTTCATCACCACCGATGACGGCCAGGACGTCTTCCTGCACGCCACGGCCCTCCCCGCGGGCACCGAGGGACTCAAGGCCGGCACGCGCCTGGACTTCGGTGTGGCCGACGGCAAGCGCGGGCTGCAGGCCCTCGCGGTCCGGGTGCTCGACGCGCCCGTGAGCCTCGCCAAGCGCAACCGGATGAAGCCGGACGACATGGCCGTCGTGGTCGAAGACCTCGTCAAGCTGCTCGACAAGGTCGGCGGCGATCTCCGCCACGGCCACTACCCCAATGCGGGTCAGGGCAAGAAGGTCGCGGCGATCCTGCGCAAGGTGGCCGATGAACTCGACGCCTGA
PROTEIN sequence
Length: 128
MPTGKVRFYDDEKGFGFITTDDGQDVFLHATALPAGTEGLKAGTRLDFGVADGKRGLQALAVRVLDAPVSLAKRNRMKPDDMAVVVEDLVKLLDKVGGDLRHGHYPNAGQGKKVAAILRKVADELDA*