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berkeley_reactor_200306_planktonic_scaffold_144812

Search features with annotation key words

Displaying items 31-60 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_144812_31
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30843..31325)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5X1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60068.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_32
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31425..31694)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5X2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07569.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_33
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31703..32713)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7I5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60066.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_34
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32779..33195
DNA (417bp) protein (139aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASJ6_9MICO
peptide methionine sulfoxide reductase
berkeley_reactor_200306_planktonic_scaffold_144812_35
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33192..33827
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9F1_9MICO
Nitroreductase {ECO:0000313|EMBL:KIC60064.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
nitroreductase
berkeley_reactor_200306_planktonic_scaffold_144812_36
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33802..34776)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5X6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07573.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_37
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35108..36832
DNA (1725bp) protein (575aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K0N5_ARTS2
hypothetical protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ABK04855.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
berkeley_reactor_200306_planktonic_scaffold_144812_38
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36832..37704
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00037851E5
Putative uncharacterized protein {ECO:0000313|EMBL:GAB16431.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
xylose isomerase domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_144812_39
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37701..39506
DNA (1806bp) protein (602aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9S8_NAKMY
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ACV79236.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
berkeley_reactor_200306_planktonic_scaffold_144812_40
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

39503..39964
DNA (462bp) protein (154aa)
Lactoylglutathione lyase n=1 Tax=Eggerthella sp. CAG:209 RepID=R6I686_9ACTN
Lactoylglutathione lyase {ECO:0000313|EMBL:CDB33547.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
GloA; lactoylglutathione lyase
berkeley_reactor_200306_planktonic_scaffold_144812_41
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39975..40901
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI000378F60E
SPG23_c16, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27609.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
LysR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_144812_42
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41049..42458
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI0003633754
Major facilitator transporter {ECO:0000313|EMBL:KIA72560.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
putative MFS transporter
berkeley_reactor_200306_planktonic_scaffold_144812_43
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42532..43395
DNA (864bp) protein (288aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
hypothetical protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI000373DC3B
shikimate 5-dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_144812_44
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43389..44129)
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=alpha proteobacterium BAL199 RepID=A8U3I9_9PROT
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KDR30480.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
short-chain dehydrogenase/reductase SDR
berkeley_reactor_200306_planktonic_scaffold_144812_45
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44252..44545
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QUD8_ARTGO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:GAB16439.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
berkeley_reactor_200306_planktonic_scaffold_144812_46
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44545..45588
DNA (1044bp) protein (348aa)
Zinc-containing alcohol dehydrogenase n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QUD9_ARTGO
Zinc-containing alcohol dehydrogenase {ECO:0000313|EMBL:GAB16440.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
YjmD (Zinc-containing alcohol dehydrogenase)
berkeley_reactor_200306_planktonic_scaffold_144812_47
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45585..47228
DNA (1644bp) protein (548aa)
Putative oxidoreductase n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QUE0_ARTGO
Putative oxidoreductase {ECO:0000313|EMBL:GAB16441.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_48
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47225..48271
DNA (1047bp) protein (349aa)
Putative oxidoreductase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JMN0_9RHOB
Putative oxidoreductase {ECO:0000313|EMBL:EBA04978.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2150.;"
oxidoreductase, Gfo/Idh/MocA family
berkeley_reactor_200306_planktonic_scaffold_144812_49
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48282..48989)
DNA (708bp) protein (236aa)
Molybdate ABC transporter periplasmic protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E744_9MICO
Molybdate ABC transporter periplasmic protein {ECO:0000313|EMBL:EIC07238.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC molybdate transporter, periplasmic ligand binding protein
berkeley_reactor_200306_planktonic_scaffold_144812_50
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48986..49960)
DNA (975bp) protein (325aa)
Aldo/keto reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E745_9MICO
Aldo/keto reductase {ECO:0000313|EMBL:EIC07239.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
aldo/keto reductase
berkeley_reactor_200306_planktonic_scaffold_144812_51
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49957..50913)
DNA (957bp) protein (319aa)
4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase (EC:1.1.1.-)
Oxidoreductase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E746_9MICO
SPG23_c16, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27646.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
berkeley_reactor_200306_planktonic_scaffold_144812_52
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50910..52262)
DNA (1353bp) protein (451aa)
pcmA; protocatechuate 4,5-dioxygenase (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase, alpha subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E747_9MICO
Protocatechuate 4,5-dioxygenase, alpha subunit {ECO:0000313|EMBL:EIC07241.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
berkeley_reactor_200306_planktonic_scaffold_144812_53
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52264..53232)
DNA (969bp) protein (323aa)
2-pyrone-4,6-dicarboxylate hydrolase (EC:3.1.1.57)
Amidohydrolase 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E748_9MICO
Amidohydrolase 2 {ECO:0000313|EMBL:EIC07242.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
berkeley_reactor_200306_planktonic_scaffold_144812_54
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53236..53928)
DNA (693bp) protein (231aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC:4.1.3.-)
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E749_9MICO
SPG23_c16, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27604.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
berkeley_reactor_200306_planktonic_scaffold_144812_55
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53939..54967)
DNA (1029bp) protein (343aa)
4-oxalomesaconate hydratase (EC:4.2.1.83)
Amidohydrolase 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E750_9MICO
Amidohydrolase 2 {ECO:0000313|EMBL:EIC07244.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
berkeley_reactor_200306_planktonic_scaffold_144812_56
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55072..56016
DNA (945bp) protein (315aa)
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E751_9MICO
LysR family transcriptional regulator {ECO:0000313|EMBL:KDA05051.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_144812_57
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56013..56669)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E752_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07246.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_58
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57082..58341
DNA (1260bp) protein (420aa)
sodium/hydrogen exchanger n=1 Tax=Microbacterium sp. B19 RepID=UPI000347CCED
Sodium:proton exchanger {ECO:0000313|EMBL:EWT04865.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_144812_59
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58352..59056
DNA (705bp) protein (235aa)
Iron dependent repressor, metal binding/dimerization domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y2D6_PROPF
Transcriptional regulator {ECO:0000313|EMBL:EWT04864.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
iron dependent repressor, metal binding/dimerization domain protein
berkeley_reactor_200306_planktonic_scaffold_144812_60
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

59376..60296
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003621AA1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
Displaying items 31-60 of 77 in total

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