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berkeley_reactor_200306_planktonic_scaffold_144812_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 55072..56016

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E751_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 301.0
  • Bit_score: 439
  • Evalue 1.50e-120
LysR family transcriptional regulator {ECO:0000313|EMBL:KDA05051.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 300.0
  • Bit_score: 443
  • Evalue 1.90e-121
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 300.0
  • Bit_score: 426
  • Evalue 3.70e-117

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGTCGCTTCCCGACCTGAACCAGTTGCGCACGTTCGTCGTGCTGTACGAGCTGCGCAGCCTGACGGCCACCGCCGACCGGCTGCACGTGACGCAGCCGACGGTCAGCTACACGCTCGCCCGCCTGCGCGAGCGCTTCGGCGATGTGCTCTTCCGACGCGAGGCGAACGCGATGGTGCCCACCGCGCGTGCGACCGCGTTGTTCGCGCCGCTGCACGAGGCGCTGGCGCAGATCGACGCGGCCGTGAGCGAGGCCGACGTGTTCGATCCGGCATCCTTCAGCGGAGAACTGGCATTGGGGCTCACCTCGATCGGCGAGCAGACGTTCCTGCCGCCGATCATGGCGAGCCTCGAGCGGGCCGCCGCTCATCCGCGGCTGCGCGTGGAGCGCGTCGACGCCGACCACGTCGAGCACGAGCTGGTGCGGGGCACCGTCGACGTCGCCATCTCCGTCTCGCACCTCGTGAGCGCGCGGCTGTGGCGCTCGCGGGTGCGCAGCGTCGAGTACGTCGCCCTCTCCTCGCGCGCCCACCCGCTCCCCGAGACGGGTGCGGACATGTTCGCCGGGCGACGCTTCGTGCAGGTCTCCTCGCGCGGCGGGCACATCTTCCCCGAGCAGTCGCTGGCCGAGCAGGGCCTGATCGACCAGGTCGCGCTCAGCGTCGTCGAGTACGCCACCGTCCCGGCGGTGCTCTCCGCCACCGACCTCGTCGTGCTGCTGCCCCGACACGTCGCCGAGGTCTTCTGCGGCTGGTTCCCCGAGCTGCGGATCGCCGAGTTGCCGTGGCCTGCGCAGAGCTCCCCGGTCGCCCTCTACAGTCGGCGCGAGGCGAGCCTCACGCCGGCGCAGCGCTGGTTCCGCTCACTCGTGCTCACCGCCGTGACCTCCGGCGAGTACGAGCCGGGTCACTCCGCAGAGCCCGACCGGCGACCGCTCGAGGACTAG
PROTEIN sequence
Length: 315
MSLPDLNQLRTFVVLYELRSLTATADRLHVTQPTVSYTLARLRERFGDVLFRREANAMVPTARATALFAPLHEALAQIDAAVSEADVFDPASFSGELALGLTSIGEQTFLPPIMASLERAAAHPRLRVERVDADHVEHELVRGTVDVAISVSHLVSARLWRSRVRSVEYVALSSRAHPLPETGADMFAGRRFVQVSSRGGHIFPEQSLAEQGLIDQVALSVVEYATVPAVLSATDLVVLLPRHVAEVFCGWFPELRIAELPWPAQSSPVALYSRREASLTPAQRWFRSLVLTAVTSGEYEPGHSAEPDRRPLED*