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berkeley_reactor_200306_planktonic_scaffold_144812_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(30492..30695)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein n=2 Tax=Microbacterium RepID=H8E5X0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 2.00e-30
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:EIC07567.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 2.80e-30
scoF4; cold shock proteins similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 4.50e-28

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCCCAGGGTACCGTCAAGTGGTTCAACGCCGAGAAGGGTTTCGGCTTCATCACCGTCACCGATGGCCAGGACGTCTTCGTCCACTACTCCAACATCGACATGTCCGGATTCCGGGTGCTCGAGGAGGGGCAGACGGTCGAGTTCACCGTCGGTGCCGGCCAGAAGGGCCCGCAGGCCGAGTCGGTCCGCGTCGTCGCCTGA
PROTEIN sequence
Length: 68
MAQGTVKWFNAEKGFGFITVTDGQDVFVHYSNIDMSGFRVLEEGQTVEFTVGAGQKGPQAESVRVVA*