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berkeley_reactor_200306_planktonic_scaffold_144812_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(69398..70588)

Top 3 Functional Annotations

Value Algorithm Source
Bifunctional enzyme IspD/IspF n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEI7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 396.0
  • Bit_score: 654
  • Evalue 3.80e-185
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 396.0
  • Bit_score: 654
  • Evalue 5.30e-185
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 391.0
  • Bit_score: 484
  • Evalue 1.90e-134

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
GTGAGCTCCGAACTTCTTCCCGTCCCGCACGTCGCCGTCATCGTCGTCGCCGCGGGCTCCGGCCAGCGTCTCGGCGTCGGTGTGCCGAAGGCCTTCGTCGGACTCGATGAGCACACCGTGTTGCGTCATGCCCTCGACGGCGTCTTCGCGGCGCCGGCCGCTCAGGTGATCGTGGTCGCACCCGCCGACCGTGTCGGCGATGCGCTCACGGACGCACTCGCCGCGGCCGGCCCCCGCCGTGACCTGGTCTCGGTGGTGGCCGGCGGCCCGACGCGGCAGGCCTCGGTGGCGGCCGGTCTGCATGCCGTGTGGCCCGACGTCGAGCGGGTGCTCGTGCACGACGCAGCCCGCGCGCTCACGCCGCCGGAGGTCTTCTCCCGCGTGATCGACGCGCTCGAGCACGGGAAGGACGCCGTCCTGCCGGTGCTGCCGATGGTCGACACCGTCAAACGGGTCGCGGGCGAGGCCGTGCGCGAAGCCGTCGACCGGTCTGACCTCGCGACCGCGCAGACCCCGCAGGGCTTCTCGCGCACCGTCATCGATGCGGCCTACGCCGCGGCATCCGCCGATCACACCGACGACGCCGCGCTCGTCCAGAGCGCCGGCACCGCCGTCTGGACCGTGGCCGGCGACGAACGGGGCTTCAAGATCACGACGCCGGCAGACCTCGACCGTGCTCGCGCACTCCTCGGCGCCCGTCCTGCCGGCACCGTGGCGGCGGCGCTGCCCCGCGTCGGGATCGGCACCGACGTGCACGCCGTCGGCGGCGAGGGCGAGCTCTGGCTGGCGGGACTCGCCTGGCCGGGCGAGCCCGGACTGCAGGGTCATTCCGACGGGGATGCCGTGGCCCACGCGATCGTCGACGCCGTGCTCGCCGCCGCCGGCCTGGGCGACATCGGCACCCACTTCGGCACCGACCAGCCGGAGTACGCGGGTGCCCACGCGGCAGTCTTCCTCGCACGGACCCGCGCGCTCGTCGCCGAGGCCGGCTACGCGGTGGGTAACGTCTCGGTGCAGGTGCAAGCGCGCCGGCCGCGCTTGTCCGCACGTCGGGCGGAGGCGGAGAGCGTGCTGTCGGCGGCGCTCGGCGCCCCTGTCACGGTGTCGGCGACGACGACCGACGGACTGGGATTCACGGGCACGGGCGAGGGCGTCGCGGCGTTCGCCGTCGCGGTCGTCGTCCCCCGCTGA
PROTEIN sequence
Length: 397
VSSELLPVPHVAVIVVAAGSGQRLGVGVPKAFVGLDEHTVLRHALDGVFAAPAAQVIVVAPADRVGDALTDALAAAGPRRDLVSVVAGGPTRQASVAAGLHAVWPDVERVLVHDAARALTPPEVFSRVIDALEHGKDAVLPVLPMVDTVKRVAGEAVREAVDRSDLATAQTPQGFSRTVIDAAYAAASADHTDDAALVQSAGTAVWTVAGDERGFKITTPADLDRARALLGARPAGTVAAALPRVGIGTDVHAVGGEGELWLAGLAWPGEPGLQGHSDGDAVAHAIVDAVLAAAGLGDIGTHFGTDQPEYAGAHAAVFLARTRALVAEAGYAVGNVSVQVQARRPRLSARRAEAESVLSAALGAPVTVSATTTDGLGFTGTGEGVAAFAVAVVVPR*