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berkeley_reactor_200306_planktonic_scaffold_144812_75

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(71761..72444)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E5Z1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 227.0
  • Bit_score: 410
  • Evalue 7.10e-112
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC60050.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 227.0
  • Bit_score: 412
  • Evalue 3.40e-112
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 227.0
  • Bit_score: 379
  • Evalue 4.90e-103

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACCCGCGTTCTGATCGTCGAGGATGAGCCCGATCTCGCCGACCCGCTTGCCTACCTGCTGCGCAGGGAGGGCTTCGACGTCGAGATCGCCGAGGACGGGCCCACGGCCGTGGAGGCCTTCGCCGCGCGCGGTGCGGACATCGTGCTGCTCGACCTCATGCTCCCGGGCATGCCGGGGACCGAGGTCTGCCGCATCATCCGGACGACCTCGAAGACGCCGATCATCATGCTGACGGCGAAGGACTCGGAGGTCGACATCGTCGTGGGTCTCGAGCTGGGTGCCGACGACTACGTCACGAAGCCCTACTCGTCGCGCGAGCTCCTCGCGCGGATGCGTGCCGTGCTGCGTCGTTCGGCGGCGGCCGACGTCGAGCTCGACGAGCGCATCGTCGAGGGGGGTCGCGTGATGATCGACATCGATCGACACACCGTGGCCGTGGACGGCGAGGTGATCCCGATGCCGCTCAAGGAGTTCGAGCTGCTGGAGGTCCTCATGCGCAACGCGGGCCGTGTGCTCACGCGCGGTCAGCTGATCGATCGTGTCTGGGGGAGCGACTACTTCGGCGACACGAAGACGCTCGACGTGCACATCAAGCGGATCCGGTCCCGCATCGAGCGCAACCCGAGCGAGCCGGTCATGCTGCTGACGGTGCGCGGGCTGGGATACCGGTTCGAGGCCTGA
PROTEIN sequence
Length: 228
MTRVLIVEDEPDLADPLAYLLRREGFDVEIAEDGPTAVEAFAARGADIVLLDLMLPGMPGTEVCRIIRTTSKTPIIMLTAKDSEVDIVVGLELGADDYVTKPYSSRELLARMRAVLRRSAAADVELDERIVEGGRVMIDIDRHTVAVDGEVIPMPLKEFELLEVLMRNAGRVLTRGQLIDRVWGSDYFGDTKTLDVHIKRIRSRIERNPSEPVMLLTVRGLGYRFEA*