ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_147250_249

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(266976..268250)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 424.0
  • Bit_score: 833
  • Evalue 1.20e-238
Serine hydroxymethyltransferase n=2 Tax=Microbacterium RepID=H8E189_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 424.0
  • Bit_score: 833
  • Evalue 8.30e-239
glyA; glycine/serine hydroxymethyltransferase similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 424.0
  • Bit_score: 764
  • Evalue 1.00e-218

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGACCGATCCCTACTTCAACGCCCCGCTCGCCGAGGTCGACCCCGAGATCGCGCAGGTCCTCGAGCGTGAGCTCGAGCGTCAGCGCGGCTACCTCGAGATGATCGCCTCGGAGAACTTCGTCCCCGTCTCCGTGCTGCAGTCGCAGGGCTCGGTGCTGACGAACAAGTACGCCGAGGGTTACCCCGGCCGTCGCTACTACGGCGGCTGCGAGGAGGTCGACGTCGCCGAGGAGCTCGCCATCCAGCGCGCCAAGGCCCTGTTCGGCGCCGAGTTCGCGAACGTCCAGCCGCACTCGGGCGCCTCCGCCAACGCGGCCGTGCTGCACGCGATCGCGCGCCCCGGCGACACCCTGCTGGGCCTCTCGCTCGACCACGGCGGCCACCTGACGCACGGCATGAAGATCAACTTCTCCGGCCGGCTCTACAACATCGTCGCCTACGGCGTCGACCCCGAGACCTCGACGATCGACATGGACGAGGTCGAGCGCCTCGCCGTCGAGCACCAGCCGAAGGTCATCATCGCCGGCTGGTCGGCCTACCCGCGCCAGCTCGACTTCGCCCGCTTCCGCGCCATCGCCGACAAGGTGGGCGCGCTGCTGTGGGTCGACATGGCGCACTTCGCCGGTCTCGTCGCCGCGGGTCTGCACCCGTCGCCGGTGCCGCACGCGCACGTCGTGAGCTCGACGGTGCACAAGACGATCGGCGGCCCCCGCTCGGGCTTCATCCTCACCAACGACGCCGATCTCGCGAAGAAGATCAACTCGGCCGTCTTCCCGGGCCAGCAGGGCGGCCCGCTCATGCACGTCATCGCCGCGAAGGCGACCGCGTTCAAGCTCGCCGCGACCCCGGAGTTCAAGGAGCGCCAGGAGCGCGTCGTGCGCGGTGCGGCGATCCTCGCCGAGCGCCTGTCGCAGCAGGACGTGAAGGATGCCGGGATCTCGGTGCGCTCCGGCGGCACCGACGTGCACCTTGTACTCGTCGACCTCCGCGACGCCGCGATCGACGGCAAGCAGGCCGAAGACCTGCTGCACGAGATCCACATCACCGTCAACCGCAACGCGGTGCCCAACGACCCGCGACCGCCGATGGTGACGTCGGGTCTGCGCATCGGCACCCCGGCGCTCGCGACCCGCGGCTTCGGCGACGCCGAGTTCACCGAGGTCGCCGACGTCATCGCGCTCGCGCTGCTTCCGGACGCCGACGTCGAGGCCCTGCGCACCCGCGTGGCGGCGCTGACCGCCGCGTTCCCGCTGTACCCCGGCCTCGCCCAGTAA
PROTEIN sequence
Length: 425
MTDPYFNAPLAEVDPEIAQVLERELERQRGYLEMIASENFVPVSVLQSQGSVLTNKYAEGYPGRRYYGGCEEVDVAEELAIQRAKALFGAEFANVQPHSGASANAAVLHAIARPGDTLLGLSLDHGGHLTHGMKINFSGRLYNIVAYGVDPETSTIDMDEVERLAVEHQPKVIIAGWSAYPRQLDFARFRAIADKVGALLWVDMAHFAGLVAAGLHPSPVPHAHVVSSTVHKTIGGPRSGFILTNDADLAKKINSAVFPGQQGGPLMHVIAAKATAFKLAATPEFKERQERVVRGAAILAERLSQQDVKDAGISVRSGGTDVHLVLVDLRDAAIDGKQAEDLLHEIHITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDAEFTEVADVIALALLPDADVEALRTRVAALTAAFPLYPGLAQ*