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berkeley_reactor_200306_planktonic_scaffold_147250_252

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 271722..272627

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Microbacterium RepID=H8E186_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 303.0
  • Bit_score: 555
  • Evalue 3.10e-155
Regulator {ECO:0000313|EMBL:EXJ51100.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 302.0
  • Bit_score: 580
  • Evalue 1.30e-162
hemagglutinin/hemolysin-like protein similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 294.0
  • Bit_score: 339
  • Evalue 7.50e-91

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGACACCCCCGATCAGCCGCGCCCCGACGTGGCCGACGTCGCCGACGCCGACCTCGTGCTGCGCACGCGTTCCGGCGACCGGCAGGCGTTCGCCGAACTGTGGCGCCGCCACTACCGTTCGGGGCTGACGGTCGCGTCGTCGATCACCTCGAGTTTCGACGCCGACGATCTGGTCCAGGAGGCGTATTCGCGCATCTATCAGGCCATCGCCAAGGGCGGCGGGCCCACGGGCTCCTTCCGCGCGTACCTGTTCACGAGCATCCGCAACACCGCGGCCGGCTGGGGCCGCGCCCGCCGTGAGACGGCGATCGACGAGCTCGAAGCACTCCCCGATCCGGATGCCGACGCGCACGCCACCGATGAGGCGCTCGATCGGAGCCTCACGCATCGCGCGTTTCGCAGCCTTCCGACCCGCTGGCAGGAGGTGCTCTGGTACACCGAGATCGAGCAGATGAAGCCGGCCGAGATCGCCCCTCTGCTGGGCATGAAGGCCACCGCCGTCGCGCAGCTCGCCTTCCGCGCGCGCGAAGGGCTCCGCGAGGCGTGGATCCAGGCCCACCTGCAGAGCGTCACCGACGGCTCCGACTGCCAGTGGACGATCGAGCGCCTCGGCGCGTACGCGCGCAACAACCTCGGCACGCGTGACCACAAGAAGCTCGAGGCGCACCTGGCGGAGTGCGCGCGCTGCACCATCGTCGCCGCCGAGGCCACCGAGGTCTCGCACCGTCTGGCCCTGGTGCTCCTGCCGCTGACGATCGGCGCGGGCGCCGCGACCGCCTACCTCGCCACCCTCCAGGGCGGCTCCGCACCGTTGGTCGCCCTCGCGGCGGGCGCCTCGGGCACCGTGCCGGGCGCGGTGACCGTGGGCCCCGGATCGGCCCCGGTGATGGGGGCGGCCGGCGCA
PROTEIN sequence
Length: 302
MDTPDQPRPDVADVADADLVLRTRSGDRQAFAELWRRHYRSGLTVASSITSSFDADDLVQEAYSRIYQAIAKGGGPTGSFRAYLFTSIRNTAAGWGRARRETAIDELEALPDPDADAHATDEALDRSLTHRAFRSLPTRWQEVLWYTEIEQMKPAEIAPLLGMKATAVAQLAFRAREGLREAWIQAHLQSVTDGSDCQWTIERLGAYARNNLGTRDHKKLEAHLAECARCTIVAAEATEVSHRLALVLLPLTIGAGAATAYLATLQGGSAPLVALAAGASGTVPGAVTVGPGSAPVMGAAGA