ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_174515_117

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 111320..112012

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E6EC32 similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 200.0
  • Bit_score: 213
  • Evalue 2.20e-52
Predicted integral membrane protein {ECO:0000313|EMBL:CDK00331.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 193.0
  • Bit_score: 201
  • Evalue 9.30e-49
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 227.0
  • Bit_score: 180
  • Evalue 3.40e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 693
GTGAGCGAGACGACGCGGCCGCGCCGCCGACGCGCGGGCTCCGGTGGCACCTCCCGCGTCGAGGCGTACTCCGACGCCGTCTTCGCGATCGCCGCGACGCTGCTCGTGCTCGATCTGACGACCGCCTCGTTCGGCGAGATCGGTTCGGATGCCGACATGTGGGCGGCCCTCGCGGGACTGTGGCCGAACGTGTCCTCGTTCGCGGTGAGCTTCGCGCTGCTGAGCGGCATGTGGATGATCCACCTGCGGCAGTTCCGTGACATCGCCGACGTCGACACGACGCTGCTGTGGCTGAACAACGCCCGGCTGCTCTTCGTCGTCCTCATCCCGTTCACGACGGCGCTGACCTCGCAGTACTCGGACTTCCTCGCGGGGCGCGTCCTGCTGCCCGTCGACTTCTTCCTCGTGGCGCTGTTCGGTCACCTGTCCTGGAGGTGGGCCGCCGCCCGCGGCGGGCAGCTGTTGCGCCCGGAGGCCGTCGAGAACGTCCGCGCGGCGAGCGCCGGCGGCATCTCCGCGGTCACGTGCGCCGCCGTCGCCGTGGCGCTGTCGCCGTGGATCGGGTCGTACGCCTTCCTCGCCTTCCTGCTCAACGGCGTGCTCGCCGCGCTCATCCTCCGCCTCACGCGGCCGCATCCGGCAGGGGATGCCGCGGGTGCGGATACCGCGGGGGCGGACGGAGAGCGCGGGTAG
PROTEIN sequence
Length: 231
VSETTRPRRRRAGSGGTSRVEAYSDAVFAIAATLLVLDLTTASFGEIGSDADMWAALAGLWPNVSSFAVSFALLSGMWMIHLRQFRDIADVDTTLLWLNNARLLFVVLIPFTTALTSQYSDFLAGRVLLPVDFFLVALFGHLSWRWAAARGGQLLRPEAVENVRAASAGGISAVTCAAVAVALSPWIGSYAFLAFLLNGVLAALILRLTRPHPAGDAAGADTAGADGERG*