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berkeley_reactor_200306_planktonic_scaffold_174515

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Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_174515_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..2150
DNA (2148bp) protein (716aa)
Elongation factor G n=2 Tax=Microbacterium RepID=H8E528_9MICO
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
fusA; translation elongation factors
berkeley_reactor_200306_planktonic_scaffold_174515_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2316..3509
DNA (1194bp) protein (398aa)
Elongation factor Tu n=2 Tax=Microbacterium RepID=H8E527_9MICO
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
GTPase - translation elongation factors
berkeley_reactor_200306_planktonic_scaffold_174515_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3660..3872
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABF9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86473.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_174515_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4760..5068
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=3 Tax=Microbacteriaceae RepID=H8E525_9MICO
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_174515_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5079..5738
DNA (660bp) protein (220aa)
50S ribosomal protein L3 n=2 Tax=Microbacterium RepID=H8E524_9MICO
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rplC; 50S ribosomal protein L3
berkeley_reactor_200306_planktonic_scaffold_174515_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5741..6403
DNA (663bp) protein (221aa)
50S ribosomal protein L4 n=2 Tax=Microbacterium RepID=H8E523_9MICO
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplD; ribosomal protein L4
berkeley_reactor_200306_planktonic_scaffold_174515_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6400..6702
DNA (303bp) protein (101aa)
50S ribosomal protein L23 n=2 Tax=Microbacterium RepID=H8E522_9MICO
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rplW; ribosomal protein L23
berkeley_reactor_200306_planktonic_scaffold_174515_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6727..7566
DNA (840bp) protein (280aa)
50S ribosomal protein L2 n=2 Tax=Microbacterium RepID=H8E521_9MICO
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplB; ribosomal protein L2
berkeley_reactor_200306_planktonic_scaffold_174515_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7579..7860
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=2 Tax=Microbacterium RepID=H8E520_9MICO
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rpsS; ribosomal protein S19
berkeley_reactor_200306_planktonic_scaffold_174515_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7899..8282
DNA (384bp) protein (128aa)
50S ribosomal protein L22 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E519_9MICO
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rplV; 50S ribosomal protein L22
berkeley_reactor_200306_planktonic_scaffold_174515_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8282..9043
DNA (762bp) protein (254aa)
30S ribosomal protein S3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E518_9MICO
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rpsC; 30S ribosomal protein S3
berkeley_reactor_200306_planktonic_scaffold_174515_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9043..9462
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABF1_9MICO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rplP; 50S ribosomal protein L16
berkeley_reactor_200306_planktonic_scaffold_174515_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9462..9776
DNA (315bp) protein (105aa)
Ribosomal protein L29 n=2 Tax=Microbacterium RepID=H8E516_9MICO
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpmC; ribosomal protein L29
berkeley_reactor_200306_planktonic_scaffold_174515_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9776..10141
DNA (366bp) protein (122aa)
30S ribosomal protein S17 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADS2_9MICO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpsQ; 30S ribosomal protein S17
berkeley_reactor_200306_planktonic_scaffold_174515_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10145..10513
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003684501
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rplN; 50S ribosomal protein L14
berkeley_reactor_200306_planktonic_scaffold_174515_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10519..10878
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E513_9MICO
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplX; ribosomal protein L24
berkeley_reactor_200306_planktonic_scaffold_174515_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10881..11471
DNA (591bp) protein (197aa)
50S ribosomal protein L5 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABE6_9MICO
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplE; 50S ribosomal protein L5
berkeley_reactor_200306_planktonic_scaffold_174515_18
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11560..11958
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Microbacterium RepID=H8E511_9MICO
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rpsH; 30S ribosomal protein S8
berkeley_reactor_200306_planktonic_scaffold_174515_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11965..12501
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E510_9MICO
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rplF; 50S ribosomal protein L6
berkeley_reactor_200306_planktonic_scaffold_174515_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12504..12863
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Microbacterium RepID=H8E509_9MICO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rplR; 50S ribosomal protein L18
berkeley_reactor_200306_planktonic_scaffold_174515_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12860..13540
DNA (681bp) protein (227aa)
30S ribosomal protein S5 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCS8_9MICO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rpsE; 30S ribosomal protein S5
berkeley_reactor_200306_planktonic_scaffold_174515_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13540..13725
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XPJ0_9MICO
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rpmD; ribosomal protein L30/L7E
berkeley_reactor_200306_planktonic_scaffold_174515_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13725..14324
DNA (600bp) protein (200aa)
50S ribosomal protein L15 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E506_9MICO
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
50S ribosomal protein L15
berkeley_reactor_200306_planktonic_scaffold_174515_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14434..15771
DNA (1338bp) protein (446aa)
Protein translocase subunit SecY n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADQ9_9MICO
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
secY; preprotein translocase subunit SecY
berkeley_reactor_200306_planktonic_scaffold_174515_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15768..16364
DNA (597bp) protein (199aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Adenylate kinase n=2 Tax=Microbacterium RepID=H8E504_9MICO
adenylate kinase
berkeley_reactor_200306_planktonic_scaffold_174515_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16364..17194
DNA (831bp) protein (277aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Methionine aminopeptidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCS3_9MICO
map; methionine aminopeptidase
berkeley_reactor_200306_planktonic_scaffold_174515_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17398..18384
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E6559
Uncharacterized protein {ECO:0000313|EMBL:KJL31219.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_174515_28
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18573..19259
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XB75_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD34971.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
protein-disulfide isomerase
berkeley_reactor_200306_planktonic_scaffold_174515_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19417..19638
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Microbacterium RepID=H8E501_9MICO
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
infA; translation initiation factor 1 (IF-1)
berkeley_reactor_200306_planktonic_scaffold_174515_30
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19712..19828
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=3 Tax=Microbacterium RepID=H8E500_9MICO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
rpmJ; 50S ribosomal protein L36
Displaying items 1-30 of 158 in total

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