ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_174515_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 12860..13540

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCS8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 432
  • Evalue 2.30e-118
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 432
  • Evalue 3.20e-118
rpsE; 30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 234.0
  • Bit_score: 370
  • Evalue 3.00e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGAGCGATGCAACTACTCAGAATGTGGAGAACGAAGTGACCGAGCAGGCTGCGGCCACCGCTCCCGTCGAGCGCGAGGCCCGCGAGCCCCGCCGCGGCGGACGCGAGCGCAACCCCAACCGCGACCGCGGTTCGCGCGACGCCGAGAAGAGCCAGTTCCTCGAGCGCGTCGTGACGATCAACCGCGTGTCGAAGGTCGTCAAGGGCGGTCGTCGCTTCAGCTTCACGGCGCTCGTCGTCGTGGGTGACGGCAACGGTCTCGTCGGCGTCGGCTACGGCAAGGCGCGTGAGGTCCCCCTCGCCATCTCCAAGGGTGTCGAAGAGGCCAAGCGCAACTTCTTCCGCGTGCCCCGCACCGGCTCGTCGATCCCGCACCCGGTGCAGGGCGAGGCCGCTGCCGGTGTCGTGCTCCTGCGTCCGGCTGCCGCCGGTACCGGTGTCATCGCCGGTGGTCCGGTTCGCGCCGTGCTCGAGTGCGCCGGCATCCACGACGTGCTCTCCAAGTCCCTCGGCTCGTCGAACACGATCAACATCGTGCACGCGACCGTCGAGGCGCTGAAGCAGCTCGAGGAGCCCCGCGCGGTCGCCGCCCGTCGTGGTCTCGACTTCGACCAGGTGGCTCCCGCCCGTCTGATCCGTGCCGAGGCTGACGCCGCGGCCGCTGCAAAGGGAGGTGCCTGA
PROTEIN sequence
Length: 227
VSDATTQNVENEVTEQAAATAPVEREAREPRRGGRERNPNRDRGSRDAEKSQFLERVVTINRVSKVVKGGRRFSFTALVVVGDGNGLVGVGYGKAREVPLAISKGVEEAKRNFFRVPRTGSSIPHPVQGEAAAGVVLLRPAAAGTGVIAGGPVRAVLECAGIHDVLSKSLGSSNTINIVHATVEALKQLEEPRAVAARRGLDFDQVAPARLIRAEADAAAAAKGGA*