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berkeley_reactor_200306_planktonic_scaffold_174515_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 12504..12863

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=2 Tax=Microbacterium RepID=H8E509_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 4.50e-57
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 6.20e-57
rplR; 50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 119.0
  • Bit_score: 204
  • Evalue 8.70e-51

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCTGTCAAGTCGAAGAGCGACGCGCGTTCGCGTCGTCACCTGCGCCTTCGCAAGAAGGTCGTGGGCACCGAGGCCCGTCCGCGCCTGGTCGTCACCCGTTCGGCCCGCCACGTCTTCGTCCAGCTCGTGGACGACAGCAAGGGCGTGACCGTCGCGTCGGCGTCGACCCTCGAGTCGGACCTGCGCACGTTCGACGGTGACAAGACCGCGAAGGCGCGCAAGGTCGGCGAGCTCGTCGCCGAGCGTGCGAAGGCGGCCGGCTTCTCGGACGTCGTGTTCGACCGCGGTGGCAACCGCTACGCGGGCCGTGTCGCAGCGATCGCCGAGGGCGCCCGCGAGGGAGGTCTGAACCTGTGA
PROTEIN sequence
Length: 120
MAVKSKSDARSRRHLRLRKKVVGTEARPRLVVTRSARHVFVQLVDDSKGVTVASASTLESDLRTFDGDKTAKARKVGELVAERAKAAGFSDVVFDRGGNRYAGRVAAIAEGAREGGLNL*