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berkeley_reactor_200306_planktonic_scaffold_174515_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 11965..12501

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E510_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 178.0
  • Bit_score: 342
  • Evalue 2.40e-91
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 178.0
  • Bit_score: 344
  • Evalue 6.80e-92
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 178.0
  • Bit_score: 323
  • Evalue 3.30e-86

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCGCGTATCGGACGTCTTCCCATCGACATCCCCGCCGGCGTCACCGTTTCGGTGGACGGCCAGGACGTCACCGTCAAGGGCCCGAAGGGCGAGCTCGCGCTCTCCGTCGCCAAGCCCATCGAGGTCAAGGTCGAGGAGAACCAGGTTCTGGTCTCCCGCCCCGACGACGAGCGCGAGTCGCGTTCGCTGCACGGGCTGACCCGCACCCTGATCAACAACAACATCATCGGCGTGACCGAGGGCTACACCAAGGGCCTCGAGGTCGTCGGCACCGGTTACCGCGTCGCACAGAAGGGCACGGCGGTCGAGTTCGCGCTCGGCTTCTCGCACCCGGTGCTCGTCGAGGCGCCGGCCGGCATCACGCTGACCGTCGAGGGCAACAACAAGCTCACCGTCAGCGGTATCTCCAAGCAGGCCGTGGGTGAGGCCGCCGCGAACATCCGCAAGATCCGCAAGCCCGAGCCGTACAAGGGCAAGGGTGTGCGCTACGCGGGCGAGGTCGTTCGCCGCAAGGCCGGAAAGGCTGGTAAGTAA
PROTEIN sequence
Length: 179
MSRIGRLPIDIPAGVTVSVDGQDVTVKGPKGELALSVAKPIEVKVEENQVLVSRPDDERESRSLHGLTRTLINNNIIGVTEGYTKGLEVVGTGYRVAQKGTAVEFALGFSHPVLVEAPAGITLTVEGNNKLTVSGISKQAVGEAAANIRKIRKPEPYKGKGVRYAGEVVRRKAGKAGK*