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berkeley_reactor_200306_planktonic_scaffold_174515

Search features with annotation key words

Displaying items 61-90 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_174515_61
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52401..53489
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B46666
Polysaccharide pyruvyl transferase CsaB {ECO:0000313|EMBL:KJF23457.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_174515_62
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53490..54956
DNA (1467bp) protein (489aa)
Membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF53_MICTS
hypothetical protein
Membrane protein {ECO:0000313|EMBL:BAJ73907.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_63
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55042..56280
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFE9_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ75222.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_64
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56358..58358
DNA (2001bp) protein (667aa)
Predicted acyltransferase n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MGX6_BRAFD
putative acyltransferase
Predicted acyltransferase {ECO:0000313|EMBL:ACU86424.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
berkeley_reactor_200306_planktonic_scaffold_174515_65
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58394..59497)
DNA (1104bp) protein (368aa)
Glycosyl transferase group 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H749_ANADF
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABS24545.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
berkeley_reactor_200306_planktonic_scaffold_174515_66
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59494..60576)
DNA (1083bp) protein (361aa)
Glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFF0_MICTS
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ75223.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_67
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60573..61697)
DNA (1125bp) protein (375aa)
Glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFF1_MICTS
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ75224.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_68
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61687..62532)
DNA (846bp) protein (282aa)
Glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFF2_MICTS
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ75225.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_69
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62529..63101)
DNA (573bp) protein (191aa)
wcaF; surface polysaccharide biosynthesis acetyl transferase (EC:2.3.1.-)
Putative surface polysaccharide biosynthesis acetyl transferase {ECO:0000313|EMBL:CAQ01694.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAQ01694.1};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
acetyltransferase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036BD113
berkeley_reactor_200306_planktonic_scaffold_174515_70
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

63156..64412
DNA (1257bp) protein (419aa)
Glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFF4_MICTS
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ75227.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_71
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

64449..65477
DNA (1029bp) protein (343aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003764D5F
GDP-D-mannose dehydratase
berkeley_reactor_200306_planktonic_scaffold_174515_72
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65556..66539
DNA (984bp) protein (328aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
GDP-L-fucose synthase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036487A6
nucleoside-diphosphate-sugar epimerase
berkeley_reactor_200306_planktonic_scaffold_174515_73
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66544..66825
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036C4D59
Uncharacterized protein {ECO:0000313|EMBL:EXJ50439.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sulfite reductase, beta subunit
berkeley_reactor_200306_planktonic_scaffold_174515_74
unknown

Not on your lists

comp(66813..67070)
DNA (258bp) protein (86aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_174515_75
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67161..67655)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ50440.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
berkeley_reactor_200306_planktonic_scaffold_174515_76
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67751..69061
DNA (1311bp) protein (437aa)
Nucleotide sugar dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4V7_9MICO
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EIC07896.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
UDP-glucose 6-dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_174515_77
unknown

Not on your lists

69072..69311
DNA (240bp) protein (80aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_174515_78
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69308..70660
DNA (1353bp) protein (451aa)
HNH endonuclease n=2 Tax=Microbacterium RepID=H8E4U4_9MICO
HNH endonuclease {ECO:0000313|EMBL:EXJ52113.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_174515_79
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70739..71119)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4U3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86417.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_174515_80
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71182..71937
DNA (756bp) protein (252aa)
Regulatory protein DeoR n=2 Tax=Microbacterium RepID=H8E4U2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86416.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transcriptional regulator of sugar metabolism
berkeley_reactor_200306_planktonic_scaffold_174515_81
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71981..73075)
DNA (1095bp) protein (365aa)
ATP-binding region ATPase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4U1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53272.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sensor signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_174515_82
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73323..74069
DNA (747bp) protein (249aa)
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E4U0_9MICO
Response regulator receiver {ECO:0000313|EMBL:EIC07879.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_174515_83
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74066..75202
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABA9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86413.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
putative signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_174515_84
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75529..75786
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADL3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07876.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
berkeley_reactor_200306_planktonic_scaffold_174515_85
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75783..76478
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AHZ0_9MICO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC59386.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_174515_86
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76708..77721
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEH4_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73840.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_87
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77810..79045
DNA (1236bp) protein (412aa)
Glycosyltransferase, probably n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEH3_MICTS
glycosyltransferase, probably
Glycosyltransferase, probably {ECO:0000313|EMBL:BAJ73839.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_88
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79042..81306
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEH2_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73838.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
berkeley_reactor_200306_planktonic_scaffold_174515_89
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81303..81782)
DNA (480bp) protein (160aa)
VanZ family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4T5_9MICO
VanZ family protein {ECO:0000313|EMBL:KIC59387.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
VanZ family protein
berkeley_reactor_200306_planktonic_scaffold_174515_90
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81909..83615
DNA (1707bp) protein (569aa)
ATP-binding region ATPase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4T4_9MICO
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:EIC07873.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Displaying items 61-90 of 158 in total

View Taxonomy