ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_174515_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 64449..65477

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 342.0
  • Bit_score: 692
  • Evalue 2.60e-196
GDP-mannose 4,6-dehydratase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003764D5F similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 341.0
  • Bit_score: 660
  • Evalue 7.70e-187
GDP-D-mannose dehydratase similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 341.0
  • Bit_score: 633
  • Evalue 2.90e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
TTGACCAAGCGCGCACTCATCACCGGCATCACGGGCCAGGACGGTTCCTACCTGGCCGAACTCCTGCTCGCGAAAGGGTACGAGGTGCACGGTCTGATCCGCCGCGCCTCCACTTTCAACACTCACCGCATCGACCACCTCTACGTCGACCCGCACGACCCCGACGCGAAGCTCTTCCTGCACTACGGCGACCTCTCGGACGGCGCGCGGATGGTCACGCTGCTCAGTGAGATCAACCCCGACGAGGTCTACAACCTCGCCGCCCAGTCGCACGTGCGGGTCTCGTTCGACGAGCCGGAGCACACGGCCGACACGACGGGAACCGGGACGGTCCGACTCCTCGAAGCGGTGCGGCTGTCCGGGATCGACACCAAGTTCTATCAGGCCTCGACGTCCGAGCTCTACGGCGCGACGCCGCCGCCGCAGAACGAGAACACGCCGTTCTACCCGCGATCGCCCTACGGTGTCGCCAAGCTCTACAGCTACTGGATCACCAAGAACTACCGCGAGGCCTACGACCTGTTCGCCGTCAACGGCATCCTCTTCAACCACGAGTCGCCGCGACGCGGCGAGACCTTCGTCACCCGCAAGATCACGCGCGCCGTCGCCCGCATCAAGGCCGGCACGCAGAAGGACATCTACCTCGGGAACCTCGAGTCGATCCGTGACTGGGGCTACGCCGCCGAGTACGTCGAGGGGATGTGGCGGATGCTGCAGGCCGACGAGCCGGAGGACTTCGTGCTGGCGACCGGTGTCGGCTACACGATCAAGGATTTCCTCGAGACGGCGTTCGGCCACGTCGGCCTGGACTGGCAGGAGTTCGTCAAGTTCGACGAGCGCTACCTGCGTCCCACCGAGGTCGATGCACTCATCGGCGACCCGGCCAAGGCGGCCGACAAGCTGGGCTGGGTGCCGACGATCGACGGGAAGGAATTGGCCAAGCTCATGGTTGACGCCGACGTGGAAGCTCTGGAGAAGGGTGCCGACTGGATCGACACCGTCAAGCTCGCGTCGTGGGGGACCCTGTGA
PROTEIN sequence
Length: 343
LTKRALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTHRIDHLYVDPHDPDAKLFLHYGDLSDGARMVTLLSEINPDEVYNLAAQSHVRVSFDEPEHTADTTGTGTVRLLEAVRLSGIDTKFYQASTSELYGATPPPQNENTPFYPRSPYGVAKLYSYWITKNYREAYDLFAVNGILFNHESPRRGETFVTRKITRAVARIKAGTQKDIYLGNLESIRDWGYAAEYVEGMWRMLQADEPEDFVLATGVGYTIKDFLETAFGHVGLDWQEFVKFDERYLRPTEVDALIGDPAKAADKLGWVPTIDGKELAKLMVDADVEALEKGADWIDTVKLASWGTL*