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berkeley_reactor_200306_planktonic_scaffold_174515_69

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(62529..63101)

Top 3 Functional Annotations

Value Algorithm Source
wcaF; surface polysaccharide biosynthesis acetyl transferase (EC:2.3.1.-) similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 183.0
  • Bit_score: 271
  • Evalue 1.60e-70
Putative surface polysaccharide biosynthesis acetyl transferase {ECO:0000313|EMBL:CAQ01694.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAQ01694.1};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 183.0
  • Bit_score: 271
  • Evalue 7.90e-70
acetyltransferase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036BD113 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 185.0
  • Bit_score: 302
  • Evalue 2.30e-79

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
GTGAGCGACATCCCGGTGATCGATCTCTCGAAGGCCCCCGGCGAGCGCGCCGCCTGGGATCAGCCCGTGTGGAAGGTGTATCTCTGGGCCGTGTTCGAGCTGGTCTTCGTCACGAACGCCTGGCAGATCAGTTCGGGGCTCCGCGTCCGCGTGCTGCGTCTGTTCGGCGCGGAGATCGGTCACGGTGTCGTGTTCCGGCCGCGCACACGCGTCAAGTTCCCCTGGAAGCTCCACATCGGCGATCGCACCTGGATCGGCGAGGGCGTCTGGTTCCACAACCAGGACCACATCCACATCGGACACGACGCCGTCATCTCGCAAGAGACGTTCCTGACCACCGGCAGCCACCGGCACCGCCGAGACATGGCCTTGATAACCCGCCCGATCACCATCGGCGACGGCGCCTGGGTCACCAGCCGCTGCGTCATCCTCGGAGGCTCCCAGATCGGACGGTCGGCGCTGATCCGTCCGCTGAGCCTGGTGGACGGCGCAGAGATCCCGCCCGCAGAGGTCTGGGGTGGGAACCCCCTCAGCTTCGTCACCCGCCGATTCACGGAAGTTGCCGCCCCATGA
PROTEIN sequence
Length: 191
VSDIPVIDLSKAPGERAAWDQPVWKVYLWAVFELVFVTNAWQISSGLRVRVLRLFGAEIGHGVVFRPRTRVKFPWKLHIGDRTWIGEGVWFHNQDHIHIGHDAVISQETFLTTGSHRHRRDMALITRPITIGDGAWVTSRCVILGGSQIGRSALIRPLSLVDGAEIPPAEVWGGNPLSFVTRRFTEVAAP*