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berkeley_reactor_200306_planktonic_scaffold_174515_158

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 162800..164170

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Agromyces italicus RepID=UPI0003B3F4E1 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 457.0
  • Bit_score: 471
  • Evalue 8.90e-130
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:KJL33648.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 455.0
  • Bit_score: 476
  • Evalue 2.30e-131
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 449.0
  • Bit_score: 370
  • Evalue 6.00e-100

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGATCCCCGTGCTCGCCGAGGGGTGGGTGTGGTGGGCCGCCGCGCTCGCCGTCGGCGTTCCGCTGGTCCTCGTGGCGCTCACCGAGATCATCGGCGTGCTCCGCCGGCGTCGGAACCCGGCCGTGCGGCCGTTGCTGCTCCTGCGCAACGCGGTCGTCCCGGTGGCGGCCCTCGTCGCCCTGCTCGCGTTCGCGACACGGTCGGATCAGGACCTCATCTGGGTGAGGATCGTCGGCACGCTCCTCGGCTTCCTGCTCATCCTGCTCCTGCTGAGCGGTCTCAACGTCGCCCTCTTCTCGTCCGCGCGCGAAGGCACCTGGCGGGAGCGCGTGCCGACGATCTTCGTGGAGATCGTGCGGCTCGTGCTCGTCGTGGTCGGGCTCGCGATCCTCTTCCAGGTCGTCTGGAACGCCGACATCGAGGGCTTGATCGCGACCCTGGGCGTCACGTCCATCATCGTGGGCCTCGCCCTGCAGAACGCCGCCGGGGGCATCGTCTCGGGCCTGCTGGTGCTGTTCGAGCAGCCGTTCAAGCTCGGCGACTGGATCGACACCGGCGGGGCGGCGGGCCGGGTGGTCGAAGTCAACTGGCGTGCTCTTCACATCGACACCGGCTCGGGACTCCAGGTGATCCCCAACGCGACGCTCGCCGGGGCGTCCTTTCGCAATCTGAGTCGACCGGCCGGGCCGTTCACCGTCGTCGTCCCCGTCGTGTTCGCGCCGGGCGATGCGCCGCACGAGGTGGCGGCGCTGCTGCGCAGTACCGCCGACGATCTGCCGATGAGGCTGGCGGAGGTCCCCTCCGGCGTGCAGTACGGCGGCGCCGGCGCCTACACCGTGGAGATCCCGGTCGCCGCGCCGAGCCAGTCGGACGAGACCATCGCGGCCTTTCTCGGACGCCTGTGGTACGCCGCACGGCGACATGGACTCGCCCTCGACAAGGTCGCACCCGATACGGCCGCGACCGAGAACCGGCTCCGCACGGTGGTCGACGACGTCGCGCGCGCCCTCCACCTCGATGCGGAGCTGCACGAGGCGGCGCTCAGCGCGTGCCGGGTGGAGCAGTACGCGCCGGGGGAGTACCTGGGTCGTGCGGGGGTCGTGCCGTCCGCGGTGAGCTACCTCGTCGAGGGCGCGGCGCGGCTGACGGCTCCGACGCGGCGCGGCGAGGTCGCCTGCGGCGACCTCCGCGACGGGGAGTTCGTGGGAACCGCCGCGGTGACGCGCGAGCCGGCTCTCGTGACCGCCGTCGCCACGGCATCCACGACGGTGCTCGTGCTGCCCGCCGAGCTCATCGCCCGGATCATCCGCGCCCATCCCGTCTTCGCGTCCGAGCTCGGAGCCGACCTCGAGCTGCGGCGGGCCCAGGCG
PROTEIN sequence
Length: 457
MIPVLAEGWVWWAAALAVGVPLVLVALTEIIGVLRRRRNPAVRPLLLLRNAVVPVAALVALLAFATRSDQDLIWVRIVGTLLGFLLILLLLSGLNVALFSSAREGTWRERVPTIFVEIVRLVLVVVGLAILFQVVWNADIEGLIATLGVTSIIVGLALQNAAGGIVSGLLVLFEQPFKLGDWIDTGGAAGRVVEVNWRALHIDTGSGLQVIPNATLAGASFRNLSRPAGPFTVVVPVVFAPGDAPHEVAALLRSTADDLPMRLAEVPSGVQYGGAGAYTVEIPVAAPSQSDETIAAFLGRLWYAARRHGLALDKVAPDTAATENRLRTVVDDVARALHLDAELHEAALSACRVEQYAPGEYLGRAGVVPSAVSYLVEGAARLTAPTRRGEVACGDLRDGEFVGTAAVTREPALVTAVATASTTVLVLPAELIARIIRAHPVFASELGADLELRRAQA