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berkeley_reactor_200306_planktonic_scaffold_174517_49

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(55514..55834)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Microbacterium RepID=H8E2B3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 194
  • Evalue 4.90e-47
Helix-turn-helix domain protein {ECO:0000313|EMBL:EIC09283.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 194
  • Evalue 6.80e-47
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 106.0
  • Bit_score: 169
  • Evalue 2.80e-40

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGATCCTGGTTCGTCAGGAGATCGGCGAAGTCCTGCGCGACTTCCGTCTGCAGAAGGGGCGCACCCTCCGTCAGGTCGCCGGGCGCGCGAGCGTCGCCCTGGGCTACCTCAGCGAGGTCGAGCGCGGTCAGAAGGAGGCGTCGAGCGAGATCCTCGCCGCGGTCGCCGAGGCCCTCGACGTCCCGATCTCGACCATCATGCGCGAGGTGGGCGACCGCCTGTCCGTCCTCGAAGGCCTGCAGGTCTTCCCCGACGTCGTCCCCGACGATCTTGCCGCCCTCGACGGCGGTCTGGTCCAGCCCGAGCTCTCGCTGCGCTGA
PROTEIN sequence
Length: 107
MILVRQEIGEVLRDFRLQKGRTLRQVAGRASVALGYLSEVERGQKEASSEILAAVAEALDVPISTIMREVGDRLSVLEGLQVFPDVVPDDLAALDGGLVQPELSLR*