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berkeley_reactor_200306_planktonic_scaffold_286276_166

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 184728..188237

Top 3 Functional Annotations

Value Algorithm Source
endo-1,4-beta-xylanase n=1 Tax=Agromyces subbeticus RepID=UPI0003B2F7B4 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 986.0
  • Bit_score: 667
  • Evalue 1.70e-188
1,4-beta-xylanase {ECO:0000313|EMBL:KJC64725.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 985.0
  • Bit_score: 661
  • Evalue 1.30e-186
endo-1,4-beta-xylanase similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 996.0
  • Bit_score: 634
  • Evalue 4.40e-179

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Taxonomy

Agreia bicolorata → Agreia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3510
ATGCTGTCCGGCACGATCGTCGGTGCGTCCACGGCGCAGGCCGCCGACGACGACGATGCCTGGTCGGGTCAGGGCAAGAGCTTCACGTCCACCCAGACCGCCGACGGCACCTTCCTGAACGCGATCATCGGCTCCGACGTGCCCGACGTGGCCACGATCCGCATCCCCGCCGGCACCGCAGGGGCGAGCATCGACACCTACTACATGATCTCCACGACGATGGAGCTGACGCCCGGCGCGCCCATCCTGCGCTCCTACGACCTCGTGAACTGGGAGATCGTCAACTACGTCTACGACGTGATGGAGGTCACCGACACCAACGCGCTCCGTAACGGCTACAGTGCCTACGGACAGGGGCAGTGGGCGAGCACCCTGCGCTACCACGACGGCACGTTCTACGTCGTGATGAACAGCAACAACAACGGTCACGCCTACCTCTTCACGACGACCGACATCGAAAGCGGACAGTGGGACAAGTTCAGCTACAACCGGAGCTTCCACGACCCCAACATCTTCTTCGACGGTGACACCCCGTACATCGTCTACGGCAGCTCGTCGACCCAGATCGCGCAGATGAGTCCCGACCTCCACTCGGTGATCAGCGACCGTGTCGCCGCCACCACGGCCACCGCGATCAACAACACGGGCCTGAGCACGACCGAGGTGATGGGCAGCGGCTGGGAGGGCAACCAGGTCGAGTACATCAACGGGTACTACTACATCCTCGGCATCACCTGGGGGAAGTACGGCCGCCAGGCGATCGTGCTGCGCTCCCGGAGCCTGCTCGGCTCCGCGGCATCCGATCCATACGAGGTCCGCGTGGGGGTCGGCTCCAACCTCGTCGCGCAGGGCGGATTCATCGGCACGGGCGATTCGGCGACGCCGCAGTGGGCGCTGCTGTTCGGCGACGACTACCCGACCGGGCGCATTCCCGTGCTGGTGCCGGTGGCGTGGGATGCCGCCGACCCGGATGCCTGGCCCGTGTTCGGCACCGGCGTCCTCGGCAGCTCGCAGGTGCCGTTGCCCGGAACGCAGCCGATGCCCGTCACGCTGAGCGCGGCGGATGCCCGCACGGCCCAGGCGGCGAGCGTCGTCACCTCCGACCAGTTCTCCAACGACGCCACGCCGCGCGACTTCCGCAACCCCAACGTGCCCGCGCCCGAGGTGGTGGTGCCCGAGTCCCGGGGCGAGCACATCGCCAACGGCACGATCGAAGCCGGCACGACGGGATGGCAGGCGCTGAGCGGCGCGAGCCTCAGCCTGGGCTACTCCACGCGCCACCAGGGCGCGATGTCGCTGAAGGTCAACGGTCGCACGACCGACGGCGCCGGCGCGTCGCAAGCGGTGACGACCCTCCAGCGCGGTTCGACCTACGCGGTGTCGGCGTGGGTGCACTACCGCGACGCCGGCAGCGACCCGGCGACGTTCGCGATCACCCTGAGCGACGGAAAGGGACACTCTTACCCGATGGCGCAGGCGAGCGTGCCCAAGGGTTCGGCCTCCGCGCCGACCACCTTCGTCCAGGTCGCGGGAGAGTTCACGGTCCCCGCTGAGGTCGACGTCGCCACCGCGAGGGTCTCGATCGTCACGGCCGGCTCGACCACCGTGCCGGACATCTTCTTCGTCGACGACGTCTCGATGGTCGGAGACCGTCCGGTGCCCGACTACTACACCTCCGCGGAGGGTGCCGACAACGGCTCCCACCTCGCCCTGCCGTGGCAGTGGGGGCACAACGTCGACAACCGGTACTGGTCGCTGACCGATCGCGACGGCTGGCTGCGTCTCACGAACGGTCGCGTCGTGACCGGTGCGGCCAACAAGCAGTACCAGCTGACGTACTTCGAGGAGGCGCGCAACACGTTGTCGCAGCGGACGTTCGCCCCGGCATCCTCCGCGCAGACGAGGCTGGACTTCTCGGGCCTCAAGGACGGGGACGTCTCGGGTCTCGCGGTCTACAACCGGCAGCTCAGCTACATCGGGGTCGCCAAGAAGGACGGCGTCTCCACGCTGGGAATCGTGAACCGTCCCGTGCGCGACTACACCGATCAGGAGTCGATCGCGACCGTGGAGGACTTCCTCGCCAGCGTCGCCGTGCCCCAGGGCGTGACCAGCGTCTCGCTCAAGGCGGACCTCAACATGCGCAAGTCCGGGGCCGACCGCAACACGGTCCGCTTCTACTACAGCTGGGACGGCGTCACCTGGCAGGCGCTGGGCGATGCGCAGGCCAAGCGCTCGTCATGGGAGTCCAAGCACTTCAAGGGCCAGCGGTTCGGGCTGTTCAGCTACGCCACGCAGACGAGCGGCGGTCACGCCGACTTCGACGACTTCTCCCTCTCCGACGTGCTGACCGCAGACGGGCTCGCCGTCGACACGGCCGACCTCGACTGGCTGGTGCGCGAGGCGTCCCGGCTGGACGAGCGCGACTACACGGCGCCGTCGTGGGCGAAGGTGCAGAAGGCGCTCTCGTGGGCGACGTCGGTGGCGGAGCCCTCGACGCAGAACGAGGTGGATGCCCCGGCGCAGGCGCTCAACAGCGCGATCGCGTCGCTCGAAGACGGGCCGTACGTCGCGCCGGTGGTCACCGCCACGGTGACGTCGAACGCGCCCGAGGTCTCCGGGTGGTACCGCGGTGCTGTGTCGGTGACGCTCGCGCTCAACGAGCGCGCGAAGGCGGACATCGAGTACCGCCAGGACGGCGGCGAGTGGAAGGGCTACGCGGGCGAGATCGTCGTCGCGGCATCCGGAGCGCACCAGCTCGACTACCGCGCCAGCGAGGACGGCGAGGCGGTCGCCGGCTCGGGCGGCACGGCGTCGTTCTCGATCGACGTCGATGCGCCGGTGACTACGGCGGTGACGGATGCCGCCGCCCGCACCGTCACCCTGACCGCGGTCGATGCGCATTCGGGCCTCGCCCGCATCGAGTACCGGATCGGCGACGCCGCGGACTGGTCGCCCGCCACCGGCGCGGTCGTCGTCGGCGATGCGGCGACGGTCGTCGGCTACCGCGCGGTCGATCTCATCGGCAACGTGGAGGCCGCGCGGACGGTCACGGTGCCCGCGGCATCCACGTCGACCCCGACGCCGGGCGGTGTGCTCGCCCCCGCGGAGAGCGATCTGACCGCGGCGCTGGAGGGTGCGGTGACCGCGCCCCGCACGGTCCGCGCGGGAGCGTCGCTCACGCTGACGGTGCCCGGTGTGCAGCCGGGAGCTCCGGTCCACGTGTGGATGTTCTCGACCCCGACGTACCTGGGGCAGGCGACGGTCACGACGGCCCACGCGGCCACCGTCACGGTGCCCGCGGGGATGAGCCTCGGCGCGCACCGCGTGGTCGTCGCCGACGCCGACGGAACGGTGATCGGGTGGGCGCCCATCACGGTGACCGCCGGCGACGACGCCCTCGCCGTGACCGGCGGCGACGCGACCACCGCCGTGTCGATCCTGCTCACCGCGCTGGTCCTCCTGGGCCTCGGGGCGCTTCTGGTGCGGCGTCGCCGCCGCGGGTCCGCCTGA
PROTEIN sequence
Length: 1170
MLSGTIVGASTAQAADDDDAWSGQGKSFTSTQTADGTFLNAIIGSDVPDVATIRIPAGTAGASIDTYYMISTTMELTPGAPILRSYDLVNWEIVNYVYDVMEVTDTNALRNGYSAYGQGQWASTLRYHDGTFYVVMNSNNNGHAYLFTTTDIESGQWDKFSYNRSFHDPNIFFDGDTPYIVYGSSSTQIAQMSPDLHSVISDRVAATTATAINNTGLSTTEVMGSGWEGNQVEYINGYYYILGITWGKYGRQAIVLRSRSLLGSAASDPYEVRVGVGSNLVAQGGFIGTGDSATPQWALLFGDDYPTGRIPVLVPVAWDAADPDAWPVFGTGVLGSSQVPLPGTQPMPVTLSAADARTAQAASVVTSDQFSNDATPRDFRNPNVPAPEVVVPESRGEHIANGTIEAGTTGWQALSGASLSLGYSTRHQGAMSLKVNGRTTDGAGASQAVTTLQRGSTYAVSAWVHYRDAGSDPATFAITLSDGKGHSYPMAQASVPKGSASAPTTFVQVAGEFTVPAEVDVATARVSIVTAGSTTVPDIFFVDDVSMVGDRPVPDYYTSAEGADNGSHLALPWQWGHNVDNRYWSLTDRDGWLRLTNGRVVTGAANKQYQLTYFEEARNTLSQRTFAPASSAQTRLDFSGLKDGDVSGLAVYNRQLSYIGVAKKDGVSTLGIVNRPVRDYTDQESIATVEDFLASVAVPQGVTSVSLKADLNMRKSGADRNTVRFYYSWDGVTWQALGDAQAKRSSWESKHFKGQRFGLFSYATQTSGGHADFDDFSLSDVLTADGLAVDTADLDWLVREASRLDERDYTAPSWAKVQKALSWATSVAEPSTQNEVDAPAQALNSAIASLEDGPYVAPVVTATVTSNAPEVSGWYRGAVSVTLALNERAKADIEYRQDGGEWKGYAGEIVVAASGAHQLDYRASEDGEAVAGSGGTASFSIDVDAPVTTAVTDAAARTVTLTAVDAHSGLARIEYRIGDAADWSPATGAVVVGDAATVVGYRAVDLIGNVEAARTVTVPAASTSTPTPGGVLAPAESDLTAALEGAVTAPRTVRAGASLTLTVPGVQPGAPVHVWMFSTPTYLGQATVTTAHAATVTVPAGMSLGAHRVVVADADGTVIGWAPITVTAGDDALAVTGGDATTAVSILLTALVLLGLGALLVRRRRRGSA*