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berkeley_reactor_200306_planktonic_scaffold_286276

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Displaying items 1-30 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_286276_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..2215
DNA (2214bp) protein (738aa)
ATPase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3U0_9MICO
ATPase {ECO:0000313|EMBL:EIC08427.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ATPase
berkeley_reactor_200306_planktonic_scaffold_286276_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2219..3304)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6T1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51964.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3392..3979
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E3U2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC56561.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_286276_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4060..6120)
DNA (2061bp) protein (687aa)
NAD synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3U3_9MICO
NAD synthase {ECO:0000313|EMBL:EIC08430.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
nadE; NAD synthase
berkeley_reactor_200306_planktonic_scaffold_286276_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6221..9835
DNA (3615bp) protein (1205aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8G5_9MICO
DNA helicase {ECO:0000313|EMBL:EXJ51948.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
superfamily I DNA and RNA helicase and helicase subunits
berkeley_reactor_200306_planktonic_scaffold_286276_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9909..10208
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E3U5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51947.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10496..11497
DNA (1002bp) protein (334aa)
Mg2 transporter protein CorA family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3U6_9MICO
Transporter {ECO:0000313|EMBL:KIC56565.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Magnesium transport protein CorA
berkeley_reactor_200306_planktonic_scaffold_286276_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11585..12217)
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Uracil phosphoribosyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3U7_9MICO
upp; uracil phosphoribosyltransferase
berkeley_reactor_200306_planktonic_scaffold_286276_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12227..13315)
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC56567.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_286276_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13326..13643)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC56568.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
berkeley_reactor_200306_planktonic_scaffold_286276_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13640..14980)
DNA (1341bp) protein (447aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JH25_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIC56569.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_12
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14977..15318)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JHP6_9ACTO
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
berkeley_reactor_200306_planktonic_scaffold_286276_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15365..15871
DNA (507bp) protein (169aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
CMP/dCMP deaminase zinc-binding protein n=2 Tax=Microbacterium RepID=H8E3U8_9MICO
cytosine/adenosine deaminase
berkeley_reactor_200306_planktonic_scaffold_286276_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15902..17014)
DNA (1113bp) protein (371aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3U9_9MICO
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EIC08436.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hydrolase or acyltransferase
berkeley_reactor_200306_planktonic_scaffold_286276_15
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17057..17800)
DNA (744bp) protein (248aa)
Asp/Glu/hydantoin racemase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035F816D
Putative Hydantoin racemase {ECO:0000313|EMBL:EPJ36059.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
Asp/Glu/hydantoin racemase
berkeley_reactor_200306_planktonic_scaffold_286276_16
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17797..19017)
DNA (1221bp) protein (407aa)
N-isopropylammelide isopropylaminohydrolase (EC:3.5.99.4)
N-isopropylammelide isopropylaminohydrolase n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HE20_ARTCA
Amidohydrolase family protein {ECO:0000313|EMBL:CCQ47224.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
berkeley_reactor_200306_planktonic_scaffold_286276_17
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19101..20633)
DNA (1533bp) protein (511aa)
Dipeptide ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLU0_9MICO
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:CCQ47223.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
oligopeptide ABC transporter substrate-binding protein
berkeley_reactor_200306_planktonic_scaffold_286276_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20630..21478)
DNA (849bp) protein (283aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Salinispora pacifica RepID=UPI0003727C04
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJL32133.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
oligopeptide ABC transporter ATP-binding protein
berkeley_reactor_200306_planktonic_scaffold_286276_19
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21475..22488)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MT90_9ACTO
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJL32132.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter ATP-binding protein
berkeley_reactor_200306_planktonic_scaffold_286276_20
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22485..23411)
DNA (927bp) protein (309aa)
Dipeptide/oligopeptide/nickel ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YTT5_9MICO
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:CCQ47220.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
nickel ABC transporter, permease subunit NikC
berkeley_reactor_200306_planktonic_scaffold_286276_21
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23408..24334)
DNA (927bp) protein (309aa)
Dipeptide/oligopeptide/nickel ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XM81_9MICO
Dipeptide/oligopeptide/nickel ABC transporter permease protein {ECO:0000313|EMBL:GAD34082.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
oligopeptide ABC transporter permease protein
berkeley_reactor_200306_planktonic_scaffold_286276_22
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24580..25575
DNA (996bp) protein (332aa)
Ornithine cyclodeaminase n=1 Tax=Gordonia sp. KTR9 RepID=J9SAK1_9ACTO
ornithine cyclodeaminase
Ornithine cyclodeaminase {ECO:0000313|EMBL:AFR47844.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. KTR9.;"
berkeley_reactor_200306_planktonic_scaffold_286276_23
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25642..26313
DNA (672bp) protein (224aa)
Putative GntR family transcriptional regulator n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5E9D8_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:KJC64422.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
GntR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_24
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26383..27216
DNA (834bp) protein (278aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Pyrroline-5-carboxylate reductase n=2 Tax=Microbacterium RepID=H8E3V0_9MICO
proC; pyrroline-5-carboxylate reductase
berkeley_reactor_200306_planktonic_scaffold_286276_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27315..28382)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6U0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08438.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28425..29096)
DNA (672bp) protein (224aa)
TrkA-N domain protein n=2 Tax=Microbacterium RepID=H8E3V2_9MICO
TrkA-N domain protein {ECO:0000313|EMBL:EIC08439.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
trkA; K+ transport systems, NAD-binding component
berkeley_reactor_200306_planktonic_scaffold_286276_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29089..30531)
DNA (1443bp) protein (481aa)
Cation transporter n=2 Tax=Microbacterium RepID=H8E3V3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84835.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
trkH; Trk-type K+ transport systems, membrane components
berkeley_reactor_200306_planktonic_scaffold_286276_28
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30602..31009
DNA (408bp) protein (136aa)
Regulatory protein ArsR n=2 Tax=Microbacterium RepID=H8E3V4_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ51938.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_29
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31142..31333
DNA (192bp) protein (64aa)
DNA binding domain protein, excisionase family n=2 Tax=Microbacterium RepID=H8E3V5_9MICO
Excisionase {ECO:0000313|EMBL:KIC56577.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
excisionase
berkeley_reactor_200306_planktonic_scaffold_286276_30
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31616..31918
DNA (303bp) protein (101aa)
Glutaredoxin 2 n=2 Tax=Microbacterium RepID=H8E3V7_9MICO
Redoxin {ECO:0000313|EMBL:EXJ51935.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
thiol-disulfide isomerase and thioredoxins
Displaying items 1-30 of 225 in total

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