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berkeley_reactor_200306_planktonic_scaffold_286276

Search features with annotation key words

Displaying items 61-90 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_286276_61
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66702..67766
DNA (1065bp) protein (355aa)
Polyprenyl synthetase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Z4_9MICO
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:EXJ51900.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
geranylgeranyl pyrophosphate synthase
berkeley_reactor_200306_planktonic_scaffold_286276_62
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67831..69204
DNA (1374bp) protein (458aa)
Ferredoxin-NADP+ reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ARX9_9MICO
Ferredoxin-NADP+ reductase {ECO:0000313|EMBL:EPD84877.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
frp; NADPH-dependent glutamate synthase beta chain
berkeley_reactor_200306_planktonic_scaffold_286276_63
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69350..70099
DNA (750bp) protein (250aa)
DNA helicase n=1 Tax=Agromyces italicus RepID=UPI0003B7860A
DNA helicase {ECO:0000313|EMBL:EXJ51898.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
superfamily I DNA and RNA helicase and helicase subunits
berkeley_reactor_200306_planktonic_scaffold_286276_64
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70233..71192
DNA (960bp) protein (320aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Z6_9MICO
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EIC08483.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
lysophospholipase
berkeley_reactor_200306_planktonic_scaffold_286276_65
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71404..73164
DNA (1761bp) protein (587aa)
AMP-dependent synthetase and ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Z8_9MICO
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIC08485.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
long-chain acyl-CoA synthetase
berkeley_reactor_200306_planktonic_scaffold_286276_66
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73237..74112
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Z9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08486.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_67
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74130..74618)
DNA (489bp) protein (163aa)
UPF0234 protein OR221_1581 n=2 Tax=Microbacterium RepID=H8E401_9MICO
UPF0234 protein HMPREF1529_01487 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_68
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74725..75186
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E403_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08490.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_trna_1
unknown

Not on your lists

75286..75367
DNA (82bp)
transferRNA Tyr
berkeley_reactor_200306_planktonic_scaffold_286276_69
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75480..76523
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E404_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08491.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_70
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76548..78143)
DNA (1596bp) protein (532aa)
FAD dependent oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E405_9MICO
FAD dependent oxidoreductase {ECO:0000313|EMBL:EXJ51891.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
phytoene dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_286276_71
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78145..78957
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8N9_9MICO
Inositol monophosphatase {ECO:0000313|EMBL:EXJ51890.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
archaeal fructose-1,6-bisphosphatase
berkeley_reactor_200306_planktonic_scaffold_286276_72
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79115..80503
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ARY8_9MICO
Peptidase M23 {ECO:0000313|EMBL:EXJ51889.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_trna_2
unknown

Not on your lists

80566..80637
DNA (72bp)
transferRNA Thr
berkeley_reactor_200306_planktonic_scaffold_286276_trna_3
unknown

Not on your lists

80673..80746
DNA (74bp)
transferRNA Met
berkeley_reactor_200306_planktonic_scaffold_286276_73
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80900..82627
DNA (1728bp) protein (576aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E412_9MICO
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXJ51888.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
multidrug ABC transporter ATPase/permease
berkeley_reactor_200306_planktonic_scaffold_286276_74
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82624..84648
DNA (2025bp) protein (675aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E413_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC08500.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
multidrug ABC transporter ATPase/permease
berkeley_reactor_200306_planktonic_scaffold_286276_75
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84645..85454
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E414_9MICO
Permease {ECO:0000313|EMBL:EXJ51886.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease
berkeley_reactor_200306_planktonic_scaffold_286276_76
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

85547..85996
DNA (450bp) protein (150aa)
UPF0336 protein HMPREF1529_01504 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADZ6_9MICO
UPF0336 protein HMPREF1529_01504 {ECO:0000256|HAMAP-Rule:MF_00799}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_77
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

85993..86406
DNA (414bp) protein (138aa)
MaoC domain protein dehydratase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E416_9MICO
Acyl dehydratase {ECO:0000313|EMBL:EXJ51884.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
acyl dehydratase
berkeley_reactor_200306_planktonic_scaffold_286276_78
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86406..87542
DNA (1137bp) protein (379aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E417_9MICO
UDP-N-acetylmuramate dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_286276_79
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87539..88309)
DNA (771bp) protein (257aa)
Phosphoesterase PA-phosphatase related protein n=2 Tax=Microbacterium RepID=H8E418_9MICO
Phosphoesterase {ECO:0000313|EMBL:KIC59866.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_80
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88363..89568)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8G0_9MICO
Aspartate aminotransferase {ECO:0000313|EMBL:EXJ51881.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
aspC; aspartate/tyrosine/aromatic aminotransferase
berkeley_reactor_200306_planktonic_scaffold_286276_81
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89597..91126)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037F3C4E
Uncharacterized protein {ECO:0000313|EMBL:EEH66963.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_82
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91145..91861)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003764689
Uncharacterized protein {ECO:0000313|EMBL:KKB81736.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
GntR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_83
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92062..93348
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003819636
Uncharacterized protein {ECO:0000313|EMBL:KKC38035.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
ABC transporter, solute-binding protein
berkeley_reactor_200306_planktonic_scaffold_286276_84
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93348..94268
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035F09B6
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KKC38034.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
binding-protein-dependent transport systems inner membrane component
berkeley_reactor_200306_planktonic_scaffold_286276_85
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94249..95127
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037C864D
Sugar ABC transporter permease {ECO:0000313|EMBL:KKC38033.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
sugar ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_286276_86
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95108..95794
DNA (687bp) protein (229aa)
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
N-acylglucosamine-6-phosphate 2-epimerase {ECO:0000256|SAAS:SAAS00074327}; EC=5.1.3.9 {ECO:0000256|SAAS:SAAS00074327};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003810A7C
berkeley_reactor_200306_planktonic_scaffold_286276_87
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95791..96762
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003618C5B
Glucokinase {ECO:0000313|EMBL:AKH85878.1}; Putative transcriptional regulator {ECO:0000313|EMBL:AIT42110.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
ROK family protein
Displaying items 61-90 of 225 in total

View Taxonomy