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berkeley_reactor_200306_planktonic_scaffold_286276

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Displaying items 91-120 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_286276_88
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96696..97274)
DNA (579bp) protein (193aa)
Cytidylate kinase {ECO:0000313|EMBL:KJL36245.1}; EC=2.7.4.25 {ECO:0000313|EMBL:KJL36245.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGT7_MICTS
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_89
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97325..98617)
DNA (1293bp) protein (431aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGT8_MICTS
L-galactonate transporter {ECO:0000313|EMBL:KJL36246.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
berkeley_reactor_200306_planktonic_scaffold_286276_90
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98720..99367)
DNA (648bp) protein (216aa)
ketohydroxyglutarate aldolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C2C3E
KHG/KDPG aldolase {ECO:0000313|EMBL:KJL36247.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
2-keto-3-deoxy-6-phosphogluconate aldolase
berkeley_reactor_200306_planktonic_scaffold_286276_91
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99463..100263
DNA (801bp) protein (267aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGU0_MICTS
Glucitol operon repressor {ECO:0000313|EMBL:KJL36248.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator of sugar metabolism
berkeley_reactor_200306_planktonic_scaffold_286276_92
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100260..101564
DNA (1305bp) protein (435aa)
Cl-channel voltage-gated family protein n=2 Tax=Microbacterium RepID=H8E420_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84900.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
chloride channel protein EriC
berkeley_reactor_200306_planktonic_scaffold_286276_93
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101586..102164)
DNA (579bp) protein (193aa)
Regulatory protein TetR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E421_9MICO
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC59869.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
regulatory protein TetR
berkeley_reactor_200306_planktonic_scaffold_286276_94
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(102157..103005)
DNA (849bp) protein (283aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E422_9MICO
Hydrolase {ECO:0000313|EMBL:EXJ51878.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
alpha/beta hydrolase fold protein
berkeley_reactor_200306_planktonic_scaffold_286276_95
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103059..104795)
DNA (1737bp) protein (579aa)
phospholipase C 2 precursor (EC:3.1.4.3)
Phospholipase C n=1 Tax=Microbacterium sp. TS-1 RepID=U2YUY4_9MICO
Phospholipase C {ECO:0000313|EMBL:GAD34438.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
berkeley_reactor_200306_planktonic_scaffold_286276_96
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

104834..105487
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XNE4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD34437.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
berkeley_reactor_200306_planktonic_scaffold_286276_97
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105466..107115)
DNA (1650bp) protein (550aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Malate synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E423_9MICO
aceB; malate synthase
berkeley_reactor_200306_planktonic_scaffold_286276_98
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107152..108468)
DNA (1317bp) protein (439aa)
Isocitrate lyase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8G4_9MICO
Isocitrate lyase {ECO:0000313|EMBL:EXJ51876.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
isocitrate lyase
berkeley_reactor_200306_planktonic_scaffold_286276_99
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

108607..110088
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE07_9MICO
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC59871.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_100
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110259..111521
DNA (1263bp) protein (421aa)
Extracellular solute-binding protein family 1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E435_9MICO
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EIC08522.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sugar ABC transporter periplasmic protein
berkeley_reactor_200306_planktonic_scaffold_286276_101
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111527..112480
DNA (954bp) protein (318aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E436_9MICO
Sugar ABC transporter permease {ECO:0000313|EMBL:KIC59882.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_286276_102
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112493..113353
DNA (861bp) protein (287aa)
Lactose/L-arabinose transport system permease n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AS16_9MICO
Lactose/L-arabinose transport system permease {ECO:0000313|EMBL:EPD84917.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
sugar ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_286276_103
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113385..115265
DNA (1881bp) protein (627aa)
Glycoside hydrolase family 3 domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E438_9MICO
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:EIC08525.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
beta-glucosidase-related glycosidase
berkeley_reactor_200306_planktonic_scaffold_286276_104
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115296..116429
DNA (1134bp) protein (378aa)
Regulatory protein LacI n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E439_9MICO
LacI family transcriptional regulator {ECO:0000313|EMBL:KIC59885.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_286276_105
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116523..117947
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE22_9MICO
Ferric reductase domain protein transmembrane component domain-containing protein {ECO:0000313|EMBL:EIC08527.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ferric reductase
berkeley_reactor_200306_planktonic_scaffold_286276_106
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117968..118477
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8T0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84921.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_286276_107
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118474..119301
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AS20_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84922.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
membrane-associated lipoprotein
berkeley_reactor_200306_planktonic_scaffold_286276_108
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(119342..120316)
DNA (975bp) protein (325aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATP-binding region ATPase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E443_9MICO
signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_286276_109
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(120313..120987)
DNA (675bp) protein (225aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E444_9MICO
Response regulator {ECO:0000313|EMBL:KIC60285.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
berkeley_reactor_200306_planktonic_scaffold_286276_110
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(121061..122596)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE29_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84925.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
regulator of polyketide synthase expression
berkeley_reactor_200306_planktonic_scaffold_286276_111
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

122750..124117
DNA (1368bp) protein (456aa)
4-aminobutyrate transaminase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8T5_9MICO
4-aminobutyrate transaminase {ECO:0000313|EMBL:EPD84926.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
gabT; 4-aminobutyrate aminotransferase
berkeley_reactor_200306_planktonic_scaffold_286276_112
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

124270..125631
DNA (1362bp) protein (454aa)
putrescine oxidase (EC:1.4.3.10)
Putrescine oxidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AS25_9MICO
Putrescine oxidase {ECO:0000313|EMBL:EXJ51863.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
berkeley_reactor_200306_planktonic_scaffold_286276_113
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

125628..126518
DNA (891bp) protein (297aa)
UspA domain-containing protein n=2 Tax=Microbacterium RepID=H8E448_9MICO
Universal stress protein UspA {ECO:0000313|EMBL:KIC59892.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
universal stress protein UspA
berkeley_reactor_200306_planktonic_scaffold_286276_114
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

126515..128077
DNA (1563bp) protein (521aa)
Amino acid permease-associated region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E449_9MICO
Large neutral amino acids transporter small subunit 2 {ECO:0000313|EMBL:KIC59893.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
amino acid transporters
berkeley_reactor_200306_planktonic_scaffold_286276_115
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

128074..129531
DNA (1458bp) protein (486aa)
Aldehyde Dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E450_9MICO
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EIC08537.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
gabD; succinate-semialdehyde dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_286276_116
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

129577..130941
DNA (1365bp) protein (455aa)
Succinate-semialdehyde dehydrogenase (NADP+) n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8U0_9MICO
Succinate-semialdehyde dehydrogenase (NADP+) {ECO:0000313|EMBL:EPD84931.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NAD-dependent aldehyde dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_286276_117
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(130948..133743)
DNA (2796bp) protein (932aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E452_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59896.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
Displaying items 91-120 of 225 in total

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