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berkeley_reactor_200306_planktonic_scaffold_286276_109

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(120313..120987)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E444_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 224.0
  • Bit_score: 404
  • Evalue 3.80e-110
Response regulator {ECO:0000313|EMBL:KIC60285.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 224.0
  • Bit_score: 405
  • Evalue 4.10e-110
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 202.0
  • Bit_score: 285
  • Evalue 9.60e-75

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGTCGCGCGACGGTGCCCGACCACGGCTGCTCTACGTCGAGGACGACCCGACGATCGCCGGGATGACCGTCGAGGTGCTCTCGGAGGTCTATGAGGTCACGCACCTCACGGACGGCCGCGCGGCCCGCGACCGCGCGCTGGCCGAACGCTTCGACGTGCTCGTGGTCGACCGCCGCCTGCCCGGGCTCGACGGCGTCGAGCTGGTGCAGGCCGTGCGCACCGCCCGCCTGACGACACCGGTCCTGCTGCTGACCGCGCTGGGCGCCGTGTCGGATCGGGTCGACGGCCTGGATGCCGGGGCCAACGACTACCTCGTGAAGCCCTTCGACTTCGACGAGCTGCTCGCGCGGCTGCGCGCCCTGGTGCGCGGCCACCGGGCGGAGGGGCGGCGGCGCCACCTCGGCGACTGGACCTTCATCGCCGAGTCGGCGGCCCTGTACGGGGCGGGCGGGGAGCGCATCGCCCTGACGGCGACGGAGGCGCGGCTGCTCGCTCTGCTCGCGGAGAGCCCCGAGCACGTGTTCTCGCGCGACGAGATCCTCGGTGCCGTCTTCTCCTCGGACGATGCGCTCAGCTCGGTCGACACCTACGTCCACTACATCCGCCGGAAGGCGTCGCCCGAGATCATCGAGACAGTGCGGGGCCGCGGCTACCGCGCCGGGAGCAGCGCATGA
PROTEIN sequence
Length: 225
MSRDGARPRLLYVEDDPTIAGMTVEVLSEVYEVTHLTDGRAARDRALAERFDVLVVDRRLPGLDGVELVQAVRTARLTTPVLLLTALGAVSDRVDGLDAGANDYLVKPFDFDELLARLRALVRGHRAEGRRRHLGDWTFIAESAALYGAGGERIALTATEARLLALLAESPEHVFSRDEILGAVFSSDDALSSVDTYVHYIRRKASPEIIETVRGRGYRAGSSA*