ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_293678_6

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(5426..6427)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN13_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 333.0
  • Bit_score: 509
  • Evalue 2.10e-141
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAD34475.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 333.0
  • Bit_score: 509
  • Evalue 3.00e-141
amino acid ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 335.0
  • Bit_score: 481
  • Evalue 1.00e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCCATCAGCAAGAAGCAGGGCATCGCCCTCGGCATCGCGGTCGTCGCCGTCGCCGCGATCGTCGGCGGCATCATCACGGCGGTCAGTCTCAACGGCTCGGCGACCGCCGCCGAGCCCGGCCCGACCGAGACCAGCGCGAACGTGTCCACCTCCGACATCCACTGGGTCCACCTGGACTCGTCCGTTCCCGCGGCCGTCGAGGCGCTCAAGGAGAGCGGCTTCACCCCGATCGAGCCCGGGAAGCTCACCGTCGCGATCGGCGCCTTCGTCCCGCCGCTGAGCTACCAGCCGGAGGGCACCTCGGCCGCGACGGACGTCGCGGGCACCGAGCCGAACATCGGCTCGCTCATCGCCGAGGCGCTGGGGCTGGAGTACAACCCCGTCGTGGTCGCCTGGGCCGACTGGCCGCTCGGCATCCAGTCGGGCAAGTACGACCTCATCGCGTCGAACGTCACGGTGACCGAGGAGCGCAAGGAGCTGTACGACTTCGCGAGCTACCGTGTCGACCAGCTCGGCTTCTACGTGAAGTCCGACAGCGCGATCACCTCCATCGCGGGCTCCGACGACATCTCGGGGCTGAAGATCATCGTGGGCTCGGGCACGAACCAGGAGAAGGTGCTGCTCGCCTGGAACGCGGAGCTCGAGAAGAAGGGCAAGGCGCCCGCCGAGCTCGTCTACTACGACGACAACGCGGCCGCGACGCTCGCGATCCAGTCGGGTCGCGCCGACGCCACCTTCGGCCCCAACGCGACCTCCGCCTGGGCCGCGCGCGAGACCGGAGACACCAAGCTCGTCGGGCTGGTGTCGGGCGGCTGGCCGCTGACGGCCAACATCGCGGCGGCGACGAAGAAGGGCAACGGCCTCATCGAGCCGGTCCAGATCGCCCTCAACGCCATCATCGACGGCGGCCAGTACGACGAGCTCCTGAAGACCTGGGGTCTGGAGGGCGAGCGGGTCGACAAGAGCGAGATCAACCCGCAGGGTCTGCCGAAGTCCTGA
PROTEIN sequence
Length: 334
MAISKKQGIALGIAVVAVAAIVGGIITAVSLNGSATAAEPGPTETSANVSTSDIHWVHLDSSVPAAVEALKESGFTPIEPGKLTVAIGAFVPPLSYQPEGTSAATDVAGTEPNIGSLIAEALGLEYNPVVVAWADWPLGIQSGKYDLIASNVTVTEERKELYDFASYRVDQLGFYVKSDSAITSIAGSDDISGLKIIVGSGTNQEKVLLAWNAELEKKGKAPAELVYYDDNAAATLAIQSGRADATFGPNATSAWAARETGDTKLVGLVSGGWPLTANIAAATKKGNGLIEPVQIALNAIIDGGQYDELLKTWGLEGERVDKSEINPQGLPKS*