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berkeley_reactor_200306_planktonic_scaffold_293678_15

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 14173..15609

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 483.0
  • Bit_score: 834
  • Evalue 5.90e-239
Diaminopimelate decarboxylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEC9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 483.0
  • Bit_score: 834
  • Evalue 4.20e-239
lysA; diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 477.0
  • Bit_score: 692
  • Evalue 5.60e-197

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
GTGTCCGCCGCCTCCGACCGCCCGCTCGTGCCCGCGTGGCTCACCGTGCCGGACGATGCGAACGCGCTCGCCGCGGCCGTGTGGCCGGCCTCGGCCGCCCGCGACGACGACGGCCAGCTGCTCATCGCCGGCGTCGGCGCCGCCGCGCTGCGCGCCCGCTTCGGCACACCGCTGTACGTCCTCGACGAGGATGCCGTGCGCCGCCGCGCCCGCGAGGTGCGCGAGGCGTTCGCCGCCGCCGCCGCCCGCCACGGGGTGCCGGCCCGGGTCTACTACGCCGGCAAGGCGTTCCTGTCGACGGAGATCGTGCGGTGGGTCACCGAAGAGGGACTCGCGGTCGACGTCGCCACCGGCGGTGAGCTCGCCGTGGCCCTTGCCGCCGGCGCCGACGCGTCGCGGCTCGGGCTGCACGGCAACAACAAGTCGGTGGCCGAGCTGGAGCGCGCCGTCGAGATCGGCATCGGCTCGATCGTCATCGACTCCCGCATCGAGCTCGAGCGGCTCGCCGCGATCGTGGAGCGCCGCGTCGCCGCCGGGGCCGAGCCGCAGGCGGTCCTCGTCCGCGTGAACAGCGGCGTGCACGCCGAGACGCACGACTTCCTCGCGACCGCCCACGAGGACCAGAAGTTCGGGTTCGCCCTCGCCGACGCCCCGGCCGTCGTCGCCCGCATCCGCGAGCTGCCGGGCCTGCGCTTCGTCGGACTGCACTGCCACATCGGCTCGCAGATCTTCGGCGCGCGCGGCTTCGAGGAGTCCGCGGCTCGCGTGGTCGACCTCCACGCGCAGCTGCTCGCCGGCGGCGACATCCCCGTCCTCAACCTGGGGGGCGGCTTCGGCATCGCCTACACGTCGGTCGATACGCCCACGCCCATCGCCGCGCTGGCCGACGGCATCGTCGACGCCGTCGCGCGCGAGTGCGAGGTCCGCGGCATCCCGCTTCCTCACCTCGCCTTCGAGCCGGGCCGCACGATCGTCGGCCGCGCCGGTGTGACCCTGTACGAGGTGGGCACCGTCAAGCCCGTGCAGGTCAGCGACGAGCTCGAACGGCTCTACGTCAGCGTCGACGGCGGCATGAGCGACAACGCGCGTCCGGCGCTGTACGGCGCGCAGTACTCCGCCCGTCTCGCATCGCGTACCTCGGATGCCGCGCCTGCCCTGGCCCGCGTGGTGGGCCGTCACTGCGAGTCCGGCGACATCGTCGTCGACGCGGAGTACCTGCCCGGCGACGTCACCCCCGGCGACCTGCTCGCCGTGCCCGCGACCGGCGCCTACTGCTTCTCGCTGTCGAGCAACTACAACTACGTGCCGCGGCCGCCGGTCGTCGCCGTCCGGGACGGCGCGGCACGGGTGATCGTGCGCGGCGAGACCATCGACGACCTGCTGGCGCGCGACCTCGGGGTCGCCTCCGGCTCCCCATCCGGCGAGGAGAACGAATGA
PROTEIN sequence
Length: 479
VSAASDRPLVPAWLTVPDDANALAAAVWPASAARDDDGQLLIAGVGAAALRARFGTPLYVLDEDAVRRRAREVREAFAAAAARHGVPARVYYAGKAFLSTEIVRWVTEEGLAVDVATGGELAVALAAGADASRLGLHGNNKSVAELERAVEIGIGSIVIDSRIELERLAAIVERRVAAGAEPQAVLVRVNSGVHAETHDFLATAHEDQKFGFALADAPAVVARIRELPGLRFVGLHCHIGSQIFGARGFEESAARVVDLHAQLLAGGDIPVLNLGGGFGIAYTSVDTPTPIAALADGIVDAVARECEVRGIPLPHLAFEPGRTIVGRAGVTLYEVGTVKPVQVSDELERLYVSVDGGMSDNARPALYGAQYSARLASRTSDAAPALARVVGRHCESGDIVVDAEYLPGDVTPGDLLAVPATGAYCFSLSSNYNYVPRPPVVAVRDGAARVIVRGETIDDLLARDLGVASGSPSGEENE*