ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_340111_93

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 96003..96758

Top 3 Functional Annotations

Value Algorithm Source
Exonuclease RNase T and DNA polymerase III n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 254.0
  • Bit_score: 429
  • Evalue 1.60e-117
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EIC08840.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 254.0
  • Bit_score: 429
  • Evalue 2.30e-117
DNA polymerase III, epsilon subunit similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 224.0
  • Bit_score: 310
  • Evalue 4.10e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGGAACAGTGGCAGGCCGTCCCGCTCTGGGAGGACGACGTCTCCACCGTCGAGACCACCCCCGTGCGACCGCCGAGATGGGTGGATGCCGTCGGCGTGTTCGATCTGGAGACGACCGGCATCGACGTCACGACCGACCGCATCGTCACGGCCCACGTCGGCCTGCTCGACGCCGACGGCGCGGCGGTCCGGGCGCAGTCGTGGCTGGCCGATCCGGGAGTGCCGATCCCCGACGGGGCGACGGCGGTGCACGGCATCACGACCGCGCACGCCCAGGAGCACGGTGCTCCGGCGGCGCAGGTCGTCGCCGCGGTCGTCGCCGCGCTGCGGGAACTGCTGGACGCGGGCATCCCGGTCGTGGCCTACAACGCGCCGTTCGACTTCTCGCTGCTGAAGTACGAGGCGCTGCGCCACGGCATCCCGCCCATCCTCGACCCCTCGCCCGTGATCGATCCGCTCGTGCTCGACAAAGCGCACGATCGCTTCCGCAAGGGCAAGCGCACGCTCGAGGCCGTCGCGGCCCACTACGCGGTTCCCCTGGTCGGCGCCCACGACGCGTCCGCAGACGCGATCGCCGCCGGGCGGGTCGCTCAGGCGCTCGCGCGGCGCTATGCGATCGACGCCGCGCTCGACGAGCTGCACACCCGACAGATCGGGTGGGCACGCGCTCAGGCCGACAGCCTCACGGAGTACTTCATCCGCATCGGACGGCTCGACCCCGAGGACCGCGTCGACGGCAGCTGGCCGATCCGCTGA
PROTEIN sequence
Length: 252
MEQWQAVPLWEDDVSTVETTPVRPPRWVDAVGVFDLETTGIDVTTDRIVTAHVGLLDADGAAVRAQSWLADPGVPIPDGATAVHGITTAHAQEHGAPAAQVVAAVVAALRELLDAGIPVVAYNAPFDFSLLKYEALRHGIPPILDPSPVIDPLVLDKAHDRFRKGKRTLEAVAAHYAVPLVGAHDASADAIAAGRVAQALARRYAIDAALDELHTRQIGWARAQADSLTEYFIRIGRLDPEDRVDGSWPIR*