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berkeley_reactor_200306_planktonic_scaffold_340111

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Displaying items 91-120 of 217 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_340111_89
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92881..93360
DNA (480bp) protein (160aa)
Transcription regulator, AsnC-type n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W4_9MICO
AsnC family transcriptional regulator {ECO:0000313|EMBL:KIC57553.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_340111_90
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93302..94393)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W3_9MICO
Multidrug DMT transporter permease {ECO:0000313|EMBL:KIC57429.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
permease of the drug/metabolite transporter (DMT) superfamily
berkeley_reactor_200306_planktonic_scaffold_340111_91
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94484..95044
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B4H0_9MICO
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding {ECO:0000313|EMBL:KIC57430.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding
berkeley_reactor_200306_planktonic_scaffold_340111_92
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95004..95903)
DNA (900bp) protein (300aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W1_9MICO
Hydrolase {ECO:0000313|EMBL:KIC57431.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hydrolase or acyltransferase
berkeley_reactor_200306_planktonic_scaffold_340111_93
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96003..96758
DNA (756bp) protein (252aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2W0_9MICO
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:EIC08840.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
DNA polymerase III, epsilon subunit
berkeley_reactor_200306_planktonic_scaffold_340111_94
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(96828..97085)
DNA (258bp) protein (86aa)
50S ribosomal protein L31 type B n=2 Tax=Microbacterium RepID=H8E2V9_9MICO
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rpmE2; ribosomal protein L31
berkeley_reactor_200306_planktonic_scaffold_340111_95
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97198..97989)
DNA (792bp) protein (264aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2V8_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC08838.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
molybdenum ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_340111_96
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98048..99241)
DNA (1194bp) protein (398aa)
Glycogen synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2V7_9MICO
Glycosyl transferase family 1 {ECO:0000313|EMBL:KIC57435.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glycosyltransferase
berkeley_reactor_200306_planktonic_scaffold_340111_97
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99288..100532
DNA (1245bp) protein (415aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Glucose-1-phosphate adenylyltransferase n=2 Tax=Microbacterium RepID=H8E2V6_9MICO
glgC; ADP-glucose pyrophosphorylase
berkeley_reactor_200306_planktonic_scaffold_340111_98
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100553..101188
DNA (636bp) protein (212aa)
Phosphoserine phosphatase SerB n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A450_9MICO
Phosphoserine phosphatase {ECO:0000313|EMBL:EXJ50685.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
serB; phosphoserine phosphatase
berkeley_reactor_200306_planktonic_scaffold_340111_99
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101260..101943
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AMS6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83487.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hydrolase or acyltransferase
berkeley_reactor_200306_planktonic_scaffold_340111_100
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101999..102709)
DNA (711bp) protein (237aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=2 Tax=Microbacterium RepID=H8E2V3_9MICO
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KIC57439.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
fabG; dehydrogenase with different specificities
berkeley_reactor_200306_planktonic_scaffold_340111_101
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102820..103368
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B4H9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50682.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_102
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103479..103781
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA69_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57441.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_103
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103778..103981
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2V0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08830.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_104
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103978..104928
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2U9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08829.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_105
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104951..106549)
DNA (1599bp) protein (533aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2U8_9MICO
ABC transporter {ECO:0000313|EMBL:EXJ50678.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ybiT; ATPase components of ABC transporters with duplicated ATPase domains
berkeley_reactor_200306_planktonic_scaffold_340111_106
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106690..107535
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036649C0
Uncharacterized protein {ECO:0000313|EMBL:EXJ50677.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
GNAT family acetyltransferase
berkeley_reactor_200306_planktonic_scaffold_340111_107
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107664..108296
DNA (633bp) protein (211aa)
BioY protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2U6_9MICO
BioY protein {ECO:0000313|EMBL:KIC57444.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_108
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108364..109389)
DNA (1026bp) protein (342aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2U5_9MICO
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC57445.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ABC transporter, periplasmic iron-siderophore binding protein precursor
berkeley_reactor_200306_planktonic_scaffold_340111_109
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109403..110248)
DNA (846bp) protein (282aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E2U4_9MICO
Iron dicitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC57446.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ABC transporter
berkeley_reactor_200306_planktonic_scaffold_340111_110
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110245..111261)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A348_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83498.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transport system permease
berkeley_reactor_200306_planktonic_scaffold_340111_111
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111258..112271)
DNA (1014bp) protein (338aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2U2_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08822.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transport system permease
berkeley_reactor_200306_planktonic_scaffold_340111_112
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(112268..113209)
DNA (942bp) protein (314aa)
FAD-binding 9 siderophore-interacting domain protein n=2 Tax=Microbacterium RepID=H8E2U1_9MICO
Siderophore-interacting protein {ECO:0000313|EMBL:KIC57449.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
siderophore-interacting protein
berkeley_reactor_200306_planktonic_scaffold_340111_113
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113256..114416)
DNA (1161bp) protein (387aa)
Aminotransferase class I and II n=2 Tax=Microbacterium RepID=H8E2U0_9MICO
Aspartate aminotransferase {ECO:0000313|EMBL:EXJ50669.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
biproductal PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
berkeley_reactor_200306_planktonic_scaffold_340111_114
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114475..114804)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2T9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50668.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
metal-sulfur cluster biosynthetic enzyme
berkeley_reactor_200306_planktonic_scaffold_340111_115
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114815..115585)
DNA (771bp) protein (257aa)
FeS assembly ATPase SufC n=2 Tax=Microbacterium RepID=H8E2T8_9MICO
Cysteine desulfurase {ECO:0000313|EMBL:KIC57451.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sufC; ABC transporter
berkeley_reactor_200306_planktonic_scaffold_340111_116
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(115600..115929)
DNA (330bp) protein (110aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=2 Tax=Microbacterium RepID=H8E2T7_9MICO
Dioxygenase {ECO:0000313|EMBL:EXJ50666.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase
berkeley_reactor_200306_planktonic_scaffold_340111_117
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(115926..117146)
DNA (1221bp) protein (407aa)
FeS assembly protein SufD n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2T6_9MICO
ABC transporter permease {ECO:0000313|EMBL:KIC57453.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ABC transporter
berkeley_reactor_200306_planktonic_scaffold_340111_118
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117146..118564)
DNA (1419bp) protein (473aa)
ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2X7D6_9MICO
ABC transporter permease protein {ECO:0000313|EMBL:GAD33336.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sufB; ABC transporter
Displaying items 91-120 of 217 in total

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