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berkeley_reactor_200306_planktonic_scaffold_340111_130

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(130570..131364)

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 264.0
  • Bit_score: 493
  • Evalue 1.80e-136
Triosephosphate isomerase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2S3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 260.0
  • Bit_score: 489
  • Evalue 1.40e-135
tpiA; triosephosphate isomerase similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 264.0
  • Bit_score: 422
  • Evalue 5.90e-116

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGGAGAGCTGATGGCGCGCACACCGCTCATCGCCGGCAACTGGAAGATGAACCTCGACCACCTGCAGGCGGTCGCGTTCGTGCAGAAGCTGCACTGGACGTTGAAGGACGCCGGACACGAGGACGGCTCGGTGGAGGCCGCGGTCTTCCCGCCCTTCACCGACATCCGCACCGTGCAGACGCTGCTGGACGCCGACAAGATCCCGTTCGCGCTCGGCGCGCAGGACCTGTCGACGCACGACTCCGGCGCCTACACCGGAGAGGTGTCCGGCGCGTTCCTGAGCAAGCTGGCCTGCCGCTACGTCATCATCGGGCACTCCGAGCGTCGCGAGTACCACCACGAGAGCGACGCCATCGTCGCCGCCAAGGTGCAGGCTGCGCTCAAGCACGGCCTGGTCCCCGTGATCTGCGTGGGCGAGACGCTCGAGCAGCGCGAGGAGTCGGGGCCGACGGCCGTGTCCGTCGCTCAGCTGCGGGCCGCGCTGGAGGGCGTGCCGGCCGATGCCGACATCGTCGTGGCGTACGAGCCCGTGTGGGCCATCGGCACCGGACAGGTGGCGTCTCCCGAGCAGGCTCAGGAGGTGTGCGTCGCGCTGCGCGGCGTGCTCGCCGAGGTGCTCGGCGCGGATGCCGCCGCTCGCACGCGCGTGCTGTACGGCGGGTCGGTGAAGTCGGGCAACATCGCCAGCTTCATGCGCGAGCCCGACGTCGACGGCGCGCTGGTGGGCGGTGCGAGCCTCGTCGCGGACGAGTTCGCGGCCATCATCCGCTACCAGAAGCACGTCGGCGTCTGA
PROTEIN sequence
Length: 265
MGELMARTPLIAGNWKMNLDHLQAVAFVQKLHWTLKDAGHEDGSVEAAVFPPFTDIRTVQTLLDADKIPFALGAQDLSTHDSGAYTGEVSGAFLSKLACRYVIIGHSERREYHHESDAIVAAKVQAALKHGLVPVICVGETLEQREESGPTAVSVAQLRAALEGVPADADIVVAYEPVWAIGTGQVASPEQAQEVCVALRGVLAEVLGADAAARTRVLYGGSVKSGNIASFMREPDVDGALVGGASLVADEFAAIIRYQKHVGV*