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berkeley_reactor_200306_planktonic_scaffold_340111_140

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(142090..143553)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.7 {ECO:0000256|HAMAP-Rule:MF_00208};; L-lysine-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:L-Lys ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 476.0
  • Bit_score: 792
  • Evalue 2.00e-226
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A375_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 479.0
  • Bit_score: 787
  • Evalue 4.60e-225
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 480.0
  • Bit_score: 397
  • Evalue 2.90e-108

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
GTGACGGGGTCGGCGACCGTGACGGGGATCTCGCTGACGACCGCGTCGACTCGTGCGGGCGACCTCTTCCTCGCCCAGCCGGGAGCGCGCACCCACGGCGCACGCTTCGTGGCGGACGCGGTCGCCGCCGGCGCCGCCGCGGTGCTCACGGATGCCGAGGGAGCCGCGATCATCGCGGAGACACCCGGCCTGGACCAGCTCGCCCGCATCGTCGTCGACGAGCACCCGCGCCGGTTCCTCGGTGCGCTCGCCGCCTGGTTCTACGGGTATCCCGCGCAGGCGCTGAAGACCATCGGCATCACCGGCACGCAGGGGAAGACCTCGACGACCTATCTCGTGGACGCCGCGCGCGGCTCGGTCCGCAGCGGCGTGATCGGGTCGATGGGGACCCGCATCGACGGCGTCGCGGTGCCCTCCACGCTGACGACCCCGGAAGCTCCGCAGATGCAGGCCCTCTTGGCTCTCATGCGCGAGCGCGGGGTCGAGGTGGTGTCGTCGGAGGTGTCCAGCCACGCCATCACGATGAATCGGGTCGCCGGGCTCCACTTCGACGTCGGCGTGTTCCTCAACCTCGGTCACGACCACCGCGACTTCCACGGCACGCAGGAGGCCTACCTCCTGGCCAAGCGCGAGCTGCTGACGAGCGCGATGTCGGGTGTCGGCCTGGTGAACGTCGACGACCGCGCCGGCCGTCGCCTGCACGCCGATCCCGAGCTGCACACGCAGTCGTATTCGGTCACCGGCCGAGAGGCGGACTGGCGGGCGGTCGATGTCGAGCTCGGCCTGCACGGATCCTCCTTCACGGTCGTGGGGCCCGAGGGGCAGTCGGCCCGCTTCACGACGCCGATGGTCGGCGAGTTCAGCGTCAGCAACATCGTCGCCGCCGTGGCGGCGCTCGACATCGTCGGGCATCCGCTGTCGGCGTCGGTCGCGGGCATCGCGACGTTCACCGGCGTCGAGGGCCGTGTACAGTTCGTGCCGGTCGACGCGCCCTTCCAGGTCGTCATCGACGCCGGTCACAAGCCCGAGGCGATCAACGCCCTCCTGCGCGCCATGCGCCCGCTCACTCCGGCACGGATCATCACGGTGATCGGCTCCAACGGCAACCGCGACATGCACAAGCGGCCTCTCATGGGCCGGTTCGCGGCGATGGCCTCGGACATCGTGATCGTCACCGACGACAACCCGGCCGACGAGGATCCCGCGACGATCCGCCGTGCGGTGGTCGCGGGCACCCGGGGCTCGCGCGCACAGGTCTTCGACGTCGCGGGACGCGCCGAGGCGATCCACAAGGCGGTCGAGCTGGCGGAGGAGGGGGACCTGATCGCGATCGTCGGCAAGGGCGACGAGCGTCACCAGATCGTGCGCGACGGCGTGATCGTTCCGCACAGCGACCCCGACGAGGTCGAGTGGGCCCTGCAGCGGCGGCGTGCCGCCGCGGCGGCCGCGGCATCCGAGGGCTGA
PROTEIN sequence
Length: 488
VTGSATVTGISLTTASTRAGDLFLAQPGARTHGARFVADAVAAGAAAVLTDAEGAAIIAETPGLDQLARIVVDEHPRRFLGALAAWFYGYPAQALKTIGITGTQGKTSTTYLVDAARGSVRSGVIGSMGTRIDGVAVPSTLTTPEAPQMQALLALMRERGVEVVSSEVSSHAITMNRVAGLHFDVGVFLNLGHDHRDFHGTQEAYLLAKRELLTSAMSGVGLVNVDDRAGRRLHADPELHTQSYSVTGREADWRAVDVELGLHGSSFTVVGPEGQSARFTTPMVGEFSVSNIVAAVAALDIVGHPLSASVAGIATFTGVEGRVQFVPVDAPFQVVIDAGHKPEAINALLRAMRPLTPARIITVIGSNGNRDMHKRPLMGRFAAMASDIVIVTDDNPADEDPATIRRAVVAGTRGSRAQVFDVAGRAEAIHKAVELAEEGDLIAIVGKGDERHQIVRDGVIVPHSDPDEVEWALQRRRAAAAAAASEG*