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berkeley_reactor_200306_planktonic_scaffold_340111_172

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(175388..178906)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 1172.0
  • Bit_score: 2318
  • Evalue 0.0
DNA polymerase III, alpha subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2N1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 1156.0
  • Bit_score: 2283
  • Evalue 0.0
dnaE; DNA polymerase III, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 1156.0
  • Bit_score: 1953
  • Evalue 0.0

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3519
GTGGCCACCGACTCCTTCGTTCATCTGCACGTGCACAGCGAATACTCGATGCTCGACGGGGCGGCGAAGATCGGCGCCATGACCCAGGCGGCGGCCGAGTACGGGATGCCGGCGATCGCGGTGACCGACCACGGCAACACCTTCGCCGCGTTCGAGTTCTACAACGCGGCCAAGGCGGCGGGGGTCAAGCCCATCATCGGCCTGGAGGCCTACGTCACGCCCGGCACGCACCGCAGCGACAAGTCGCGCGTCGCGTGGGGCTCGCCCGACCAGAAGAGCGATGACGTGTCGGGATCGGGCGCCTACACGCACATGACGATGTGGAGCCAGAGCACGGAGGGCATGCACAACCTCTTCCGGCTCAGCTCGCTCTCGAGCATGGAGGGCTACTACTTCAAGCCGCGGATGGACCGCGAGCTGCTCCAGACCTACGGCAAGGGGCTCATCGCCACGACGGGGTGCCCCTCCGGCGAGGTGCAGACCCGGCTGCGACTCGGGCAGTACGACGCCGCGCGCGCGGCGGCGGCGGAGTTCCAGGACATCTTCGGCAAGGAGAACTACTTCGCCGAGATCATGGACCACGGCCTCTCGATCGAGCGTCGCGTGATGACCGACCTCATCCGGCTGGCGAAGGACCTCGACATCCCGCTCGTCGCGACGAACGACTCGCACTACACGCACCAGCACGAGGCCGACGCGCACGAGGCCCTGCTCTGCGTCCAGTCCGGCTCGACGCTCGACGACCCGAACCGGTTCAAGTTCGACGGCGACGGCTACTACATCAAGACCGCCGCCGAGATGCGACAGCTGTTCCGCGATCACCCCGAGGCGTGCGACAACACGCTCCTGATCGCCGAGCGCTGCGAGGTCGAGTTCAACACCTCTGCCAACTACATGCCGCGCTTCCCGGTTCCCGCCGGGGAGACCGAGGACAGCTGGCTCATCAAGGAGGTCGAGGCGGGGCTGCACTACCGCTATCCCGGCGGCATCCCCGACAAGGTGCGCAAACAGGCCGAGTACGAGACCGGCATCATCCTGCAGATGGGCTTCCCGGGCTACTTCCTCGTCGTCGCCGACTTCATCAACTGGGCCAAGGACAACGGCATCCGCGTGGGTCCGGGGCGCGGCTCGGGCGCCGGGTCGATGGTCGCGTACGCCATGCGCATCACCGACCTCGACCCGCTCGAGCACGGCCTAATCTTCGAGCGCTTCCTCAACCCCGACCGCGTCTCCATGCCCGACTTCGACGTCGACTTCGACGACCGTCGCCGCGGCGAGGTGATCGACTACGTGACCGCGAAGTACGGCTCCGAACGCGTCGCGCAGATCGTCACCTACGGCACCATCAAGTCGAAGCAGGCCCTCAAGGATGCCGGCCGCGTGCTCGGCTTCCCGTTCAGCATGGGGGAGCGGCTGACCAAGGCCATGCCTCCGGCGGTGATGGGCAAGGACATGCCGCTGTCGGGCATGTACGACAGCGCCCACCCGCGCTTCAAGGAGGCGAGCGAGTTCCGCTCGCTCATCGACACCGACCCCGAGGCCAAGACGGTGTTCGATCGCGCGCTGGGTCTGGAGGGTCTGAAACGTCAGTGGGGCGTGCACGCGGCGGGCGTTATCATGTCCAGCGAGCCGCTGCTGGACATCATCCCGATCATGCGCCGCGAGCAGGACGGCCAGATCGTCACCCAGTTCGACTATCCGTCGTGCGAGGCCCTCGGGCTGATCAAGATGGACTTCCTGGGCCTTCGCAACCTGACGATCATCTCCGACGCGCTCGACAACATCCGCCTGAACCGCGGGGAGGAGCTCGACCTCGAGCACCTGACTCTGGACGACCGCGACGCCTACGATCTGCTCACCCGCGGTGACACGCTCGGCGTCTTCCAGCTCGACGGCGGACCGATGCGGGCGCTGCTGCGGCTGATGAAGCCCGACAACTTCGAGGACATCTCGGCCGTCATCGCGCTGTACCGCCCCGGTCCCATGGGCGCGAACTCGCACACCAACTACGCGCTGCGCAAGAACGGTCAGCAGCCCATCACTCCGATCCACCCGGAGCTCGAGGAGCCGCTGCGCGACATCCTCGACACCACCTACGGCCTGATCATCTATCAGGAGCAGGTCATGGCGATCGCGCAGAAGGTGGCGGGGTTCTCGCTCGGACAGGCCGACATCCTGCGTCGCGCCATGGGCAAGAAGAAGAAGTCCGAGCTCGACAAGCAGTACGAGGGCTTCTCCGGAGGCATGAAGGAGCGCGGGTACGGCGAGGCGGCCGTCCAGGCGCTGTGGGACATCCTCCTGCCGTTCTCCGACTACGCGTTCAACAAGGCGCACTCCGCGGCCTACGGACTCGTCTCGTACTGGACGGCGTATCTCAAGGCCCACTACCCGGCCGAGTACATGGCCGCCCTGCTGACCAGCGTCGGCGACTCCAAGGACAAGATGGCGGTGTACCTCAACGAGTGCCGCCGCATGGGCATCCGGGTGCTCCCGCCCGACGTGAGCGAGTCGATCCGCTACTTCGCGGCCGTCGGCGAGGACATCCGCTTCGGCCTCGGTGCCGTCCGCAACGTCGGCGCCAACGTCGTCGACGGCATCGTCGAGGCGCGCGGTGAGGAGGGCTTCTCGAGCTTCCACCACTTCCTCGACACGGTGCCGATGCACGTCGCCAACAAGCGCACCGTCGAGTCGCTCATCAAGGCGGGCGCCTTCGACTCGATGGGCGACACGCGTCGCGCGCTGCTCGAGGTGCACGAGGATGCCGTCGAGGCCGCCGTCGACCGCAAGCGCAACGAGGCCCAGGGCGCCATCGGGTTCGACTTCGACAGTCTCTACGACGCCGCCGAGGAAGTCGTCCCGCCGAAGGTGCCGCCGCGGCCCGAGTGGACGAAGAAGGACAAGCTGGCCTTCGAGCGCGAGATGCTCGGCCTGTACGTCTCCGATCACCCGCTGGCCGGCCTGGAGATCCCGCTCGCGAAGCACGCGTCGCTCTCGATCCACGATCTGCTCTCCTCCGACGACATCAACGACGGCGACATCGTGACGGTGGCCGGGCTCGTGACGAGCGTGCAGCACCGCGTCGCGAAGCAGAGCGGCAACCCGTACGGCATGATCACCGTCGAGGACTTCGACGGTGAGGTCACCGTGATGTTCATGGGGAAGACCTACACGGAGTTCCAGTCGATGCTCGTGGCGGACAGCATCCTCGTCGTGCGGGGGCGCGTGTCGCGGCGCGACGACGGCCTCAACCTGCACGGTCAGTCCGCGTTCTCGCCCGACCTCGGCTCCGTGGACGCCACCGGCTCGCTCGTGCTCCTCATGCCGGAACATCGCGCCACCGAGCGGATCGTCACCGAACTGGCCCAGGTGTTCTCGCGGCATCCGGGCGACACCGAGGTGACGCTCAAACTCCACAAGAGCGGCGTGGCGAAGGTGTTCGAGGTGCCCGCCCAGGTGCGCGTGACCGTCGATCTCTACGGTGAGCTGAAGGGCCTTCTCGGACCGCAATGTCTCGGCTGA
PROTEIN sequence
Length: 1173
VATDSFVHLHVHSEYSMLDGAAKIGAMTQAAAEYGMPAIAVTDHGNTFAAFEFYNAAKAAGVKPIIGLEAYVTPGTHRSDKSRVAWGSPDQKSDDVSGSGAYTHMTMWSQSTEGMHNLFRLSSLSSMEGYYFKPRMDRELLQTYGKGLIATTGCPSGEVQTRLRLGQYDAARAAAAEFQDIFGKENYFAEIMDHGLSIERRVMTDLIRLAKDLDIPLVATNDSHYTHQHEADAHEALLCVQSGSTLDDPNRFKFDGDGYYIKTAAEMRQLFRDHPEACDNTLLIAERCEVEFNTSANYMPRFPVPAGETEDSWLIKEVEAGLHYRYPGGIPDKVRKQAEYETGIILQMGFPGYFLVVADFINWAKDNGIRVGPGRGSGAGSMVAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFDDRRRGEVIDYVTAKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPAVMGKDMPLSGMYDSAHPRFKEASEFRSLIDTDPEAKTVFDRALGLEGLKRQWGVHAAGVIMSSEPLLDIIPIMRREQDGQIVTQFDYPSCEALGLIKMDFLGLRNLTIISDALDNIRLNRGEELDLEHLTLDDRDAYDLLTRGDTLGVFQLDGGPMRALLRLMKPDNFEDISAVIALYRPGPMGANSHTNYALRKNGQQPITPIHPELEEPLRDILDTTYGLIIYQEQVMAIAQKVAGFSLGQADILRRAMGKKKKSELDKQYEGFSGGMKERGYGEAAVQALWDILLPFSDYAFNKAHSAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAVYLNECRRMGIRVLPPDVSESIRYFAAVGEDIRFGLGAVRNVGANVVDGIVEARGEEGFSSFHHFLDTVPMHVANKRTVESLIKAGAFDSMGDTRRALLEVHEDAVEAAVDRKRNEAQGAIGFDFDSLYDAAEEVVPPKVPPRPEWTKKDKLAFEREMLGLYVSDHPLAGLEIPLAKHASLSIHDLLSSDDINDGDIVTVAGLVTSVQHRVAKQSGNPYGMITVEDFDGEVTVMFMGKTYTEFQSMLVADSILVVRGRVSRRDDGLNLHGQSAFSPDLGSVDATGSLVLLMPEHRATERIVTELAQVFSRHPGDTEVTLKLHKSGVAKVFEVPAQVRVTVDLYGELKGLLGPQCLG*