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berkeley_reactor_200306_planktonic_scaffold_340111

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Displaying items 151-180 of 217 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_340111_149
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

153319..153855
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003672E36
Uncharacterized protein {ECO:0000313|EMBL:EXJ51704.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
berkeley_reactor_200306_planktonic_scaffold_340111_150
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

153843..154592
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A383_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83538.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_151
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

154630..155547
DNA (918bp) protein (306aa)
5'-3' exonuclease, resolvase-like domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2Q2_9MICO
5'-3' exonuclease {ECO:0000313|EMBL:EXJ51706.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
5'-3' exonuclease
berkeley_reactor_200306_planktonic_scaffold_340111_152
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156018..157004)
DNA (987bp) protein (329aa)
PHP domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2Q1_9MICO
PHP domain protein {ECO:0000313|EMBL:EIC08781.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
histidinol phosphatase
berkeley_reactor_200306_planktonic_scaffold_340111_153
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(157076..157567)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2Q0_9MICO
LigA {ECO:0000313|EMBL:KIC57484.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_154
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(157663..158724)
DNA (1062bp) protein (354aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Anthranilate phosphoribosyltransferase n=2 Tax=Microbacterium RepID=H8E2P9_9MICO
trpD; anthranilate phosphoribosyltransferase
berkeley_reactor_200306_planktonic_scaffold_340111_155
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

158846..159490
DNA (645bp) protein (215aa)
Cytochrome c oxidase subunit III n=2 Tax=Microbacterium RepID=H8E2P8_9MICO
Cytochrome B561 {ECO:0000313|EMBL:KIC57486.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ctaE; heme/copper-type cytochrome/quinol oxidase, subunit 3
berkeley_reactor_200306_planktonic_scaffold_340111_156
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

159511..160311
DNA (801bp) protein (267aa)
Cytochrome c class I n=2 Tax=Microbacterium RepID=H8E2P7_9MICO
Cytochrome c class I {ECO:0000313|EMBL:EIC08777.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
qcrC; cytochrome C
berkeley_reactor_200306_planktonic_scaffold_340111_157
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

160358..161437
DNA (1080bp) protein (360aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=2 Tax=Microbacterium RepID=H8E2P6_9MICO
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:EXJ51712.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
qcrA; rieske Fe-S protein
berkeley_reactor_200306_planktonic_scaffold_340111_158
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

161434..163257
DNA (1824bp) protein (608aa)
Cytochrome b/b6 domain-containing protein n=2 Tax=Microbacterium RepID=H8E2P5_9MICO
Menaquinol-cytochrome C reductase cytochrome b subunit {ECO:0000313|EMBL:EXJ51713.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
qcrB; cytochrome b subunit of the bc complex
berkeley_reactor_200306_planktonic_scaffold_340111_159
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

163344..163763
DNA (420bp) protein (140aa)
Rhodanese-like protein n=2 Tax=Microbacterium RepID=H8E2P4_9MICO
Sulfurtransferase {ECO:0000313|EMBL:KIC57490.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rhodanese-related sulfurtransferase
berkeley_reactor_200306_planktonic_scaffold_340111_160
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(163780..164577)
DNA (798bp) protein (266aa)
Protein phosphatase 2C domain protein n=2 Tax=Microbacterium RepID=H8E2P3_9MICO
Protein phosphatase 2C domain protein {ECO:0000313|EMBL:EIC08773.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
serine/threonine protein phosphatase
berkeley_reactor_200306_planktonic_scaffold_340111_161
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164598..165032)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2P2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08772.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_162
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(165033..166796)
DNA (1764bp) protein (588aa)
Cytochrome c oxidase, subunit I n=2 Tax=Microbacterium RepID=H8E2P1_9MICO
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:KIC57493.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
heme/copper-type cytochrome/quinol oxidase, subunit 1
berkeley_reactor_200306_planktonic_scaffold_340111_163
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166796..167701)
DNA (906bp) protein (302aa)
Cytochrome c oxidase subunit II n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2P0_9MICO
Cytochrome C oxidase subunit II {ECO:0000313|EMBL:KIC57560.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
heme/copper-type cytochrome/quinol oxidase, subunit 2
berkeley_reactor_200306_planktonic_scaffold_340111_164
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(167838..168209)
DNA (372bp) protein (124aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Microbacterium RepID=H8E2N9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51719.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_165
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(168303..169754)
DNA (1452bp) protein (484aa)
Peptidase M20 n=2 Tax=Microbacterium RepID=H8E2N8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51720.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase
berkeley_reactor_200306_planktonic_scaffold_340111_166
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

169784..170344
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2N7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83554.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_167
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

170346..171371
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2N6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51722.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
berkeley_reactor_200306_planktonic_scaffold_340111_168
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(171337..172368)
DNA (1032bp) protein (344aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4D8_9MICO
pyrD; dihydroorotate dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_340111_169
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172421..172885)
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR n=2 Tax=Microbacterium RepID=H8E2N4_9MICO
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
nrdR; transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_340111_170
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172889..174205)
DNA (1317bp) protein (439aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Histidinol dehydrogenase n=2 Tax=Microbacterium RepID=H8E2N3_9MICO
hisD; histidinol dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_340111_171
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(174215..175330)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2N2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08762.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_340111_172
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(175388..178906)
DNA (3519bp) protein (1173aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
DNA polymerase III, alpha subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2N1_9MICO
dnaE; DNA polymerase III, alpha subunit
berkeley_reactor_200306_planktonic_scaffold_340111_173
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179011..179484
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4E3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83561.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
berkeley_reactor_200306_planktonic_scaffold_340111_174
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(179488..181185)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AN05_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83562.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
berkeley_reactor_200306_planktonic_scaffold_340111_175
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(181247..182164)
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Pseudouridine synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3A4_9MICO
rlu; pseudouridylate synthase, 23S RNA-specific
berkeley_reactor_200306_planktonic_scaffold_340111_176
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(182164..182769)
DNA (606bp) protein (202aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Lipoprotein signal peptidase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2M7_9MICO
lipoprotein signal peptidase
berkeley_reactor_200306_planktonic_scaffold_340111_177
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(182775..183371)
DNA (597bp) protein (199aa)
DivIVA domain-containing protein n=2 Tax=Microbacterium RepID=H8E2M6_9MICO
Cell division protein {ECO:0000313|EMBL:KIC57505.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
cell division initiation protein
berkeley_reactor_200306_planktonic_scaffold_340111_178
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(183479..183781)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2M5_9MICO
Membrane protein {ECO:0000313|EMBL:KIC57506.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
integral membrane protein
Displaying items 151-180 of 217 in total

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