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berkeley_reactor_200306_planktonic_scaffold_340111_175

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(181247..182164)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 305.0
  • Bit_score: 596
  • Evalue 1.70e-167
Pseudouridine synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3A4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 305.0
  • Bit_score: 596
  • Evalue 1.20e-167
rlu; pseudouridylate synthase, 23S RNA-specific similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 304.0
  • Bit_score: 539
  • Evalue 3.80e-151

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCCGTCACGCACCCTTCCCATCCCCGACGGTCTCGACGGCGTCCGGGTGGATGCCGCCCTCGCCAAGATGCTGGGGTTCTCGCGCACCTTCGCGGCCGAGGTCGCCGAAGCCGGCGGCGTGCGGATGGACGGGCGCCCGCTCGGTAAATCGGATCGTCTGCGCGCCGGGGGATGGCTCGAGCTCGAGTGGGAAGACCGCCGCGAGCCGGAGATCGTCCCCCTCGCGGTGCCCGACCTCGGGATCGTCTACGACGACGACGAGATCGTGGTCGTCGACAAGCCCGCGGGCGTCGCGGCGCATCCGTCGCTCGGCTGGGAGGGACCCACGGTCCTGGGCGCGCTGGCCGCGGCGGGCTTCCGGGTCGCCACGACGGGCGCCGCCGAACGCCAGGGTGTGGTGCATCGCCTCGACGTCGGTACGAGCGGCCTCATGGTCGTCGCCAAGACGGAGCGCGCGTACACCGCGCTCAAGCGGGCCTTCAAGGAGCGCGAGGTCGACAAGATCTACCACGCCGTCGTCCAGGGCCACCCCGACCCCCTCGCGGGCACGATCGATGCGCCGATCGGCCGCCATCCCTCCCACTCGTGGAAGTTCGCCGTGACCCCCGACGGCAAGGACTCGATCACCCACTACGAGACGCTCGAGGCGTTCCCGTCGGCCGCGCTGCTGGAGATCCACCTCGAGACGGGACGCACCCACCAGATCCGCGTGCACATGGCGGCGCACCGGCATCCCTGCGTCGGCGATCCGCTGTACGGGGCCGACCCCACCCTCTCGGCGCGGCTCGGCCTGTCGCGGCAGTGGCTGCACGCGCACGAGCTGTCGTTCTCGCACCCCGCCACGACGGAGTGGGTCACGTTCTCGAGCGACTACCCGGCCGACCTGGCCCACGCGCTCGACGTGCTGCGCGGCTGA
PROTEIN sequence
Length: 306
MPSRTLPIPDGLDGVRVDAALAKMLGFSRTFAAEVAEAGGVRMDGRPLGKSDRLRAGGWLELEWEDRREPEIVPLAVPDLGIVYDDDEIVVVDKPAGVAAHPSLGWEGPTVLGALAAAGFRVATTGAAERQGVVHRLDVGTSGLMVVAKTERAYTALKRAFKEREVDKIYHAVVQGHPDPLAGTIDAPIGRHPSHSWKFAVTPDGKDSITHYETLEAFPSAALLEIHLETGRTHQIRVHMAAHRHPCVGDPLYGADPTLSARLGLSRQWLHAHELSFSHPATTEWVTFSSDYPADLAHALDVLRG*