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SCN_reactora_scaffold_20722

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Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN_reactora_scaffold_20722_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..2127)
DNA (2127bp) protein (709aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2I5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00086.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
type IIS restriction/modification enzyme
SCN_reactora_scaffold_20722_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2134..3048)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036950BD
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AKD56215.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCN_reactora_scaffold_20722_trna_4
unknown

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comp(3277..3351)
DNA (75bp)
transferRNA Val
SCN_reactora_scaffold_20722_trna_1
unknown

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3640..3711
DNA (72bp)
transferRNA Arg
SCN_reactora_scaffold_20722_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3886..5244)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IWG8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02478.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCN_reactora_scaffold_20722_4
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

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5328..6272
DNA (945bp) protein (315aa)
Regulatory protein pocR n=1 Tax=Bacteroidales bacterium CF RepID=U5Q8L4_9BACT
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCN_reactora_scaffold_20722_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6328..7461)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITR3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99447.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Zn-dependent hydrolase of beta-lactamase fold protein
SCN_reactora_scaffold_20722_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7736..9046
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV85_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02535.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
outer membrane protein
SCN_reactora_scaffold_20722_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9070..10152
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X1H9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05963.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RND family efflux transporter, MFP subunit
SCN_reactora_scaffold_20722_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10157..13363
DNA (3207bp) protein (1069aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02533.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
cation/multidrug efflux pump
SCN_reactora_scaffold_20722_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13366..13677
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02532.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCN_reactora_scaffold_20722_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13680..13868
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02531.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCN_reactora_scaffold_20722_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13945..17940)
DNA (3996bp) protein (1332aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZK1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01326.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
histidine kinase
SCN_reactora_scaffold_20722_12
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18182..19135
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZK2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01327.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
glycoside hydrolase family protein
SCN_reactora_scaffold_20722_13
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19174..21192
DNA (2019bp) protein (673aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZL0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01134.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCN_reactora_scaffold_20722_14
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21200..22201
DNA (1002bp) protein (334aa)
Arabinan endo-1,5-alpha-L-arabinosidase {ECO:0000256|PIRNR:PIRNR026534}; EC=3.2.1.99 {ECO:0000256|PIRNR:PIRNR026534};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Arabinan endo-1,5-alpha-L-arabinosidase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X4W6_9PORP
glycoside hydrolase family protein
SCN_reactora_scaffold_20722_15
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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22215..23342
DNA (1128bp) protein (376aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Aldose 1-epimerase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SA36_PEDSD
SCN_reactora_scaffold_20722_16
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23630..26923
DNA (3294bp) protein (1098aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZK4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01128.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
TonB-dependent receptor plug
SCN_reactora_scaffold_20722_17
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26935..28932
DNA (1998bp) protein (666aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01129.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
RagB/SusD domain-containing protein
SCN_reactora_scaffold_20722_18
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29177..30463
DNA (1287bp) protein (429aa)
Tat pathway signal sequence domain protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DRM2_9BACE
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD92683.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
hydrogenase
SCN_reactora_scaffold_20722_19
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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30460..30702
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q8A235_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES68872.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
SCN_reactora_scaffold_20722_20
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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30713..31540
DNA (828bp) protein (276aa)
ApbE-like lipoprotein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6UUE1_9BACE
ApbE-like lipoprotein {ECO:0000313|EMBL:CDC88065.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
SCN_reactora_scaffold_20722_21
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31562..32989
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01132.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
oxidoreductase domain protein
SCN_reactora_scaffold_20722_22
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33013..34371
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISV2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02047.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCN_reactora_scaffold_20722_23
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34388..36880
DNA (2493bp) protein (831aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1R2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00431.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
glutaminase
SCN_reactora_scaffold_20722_24
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37293..38009
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYR7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04090.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
NUDIX family hydrolase
SCN_reactora_scaffold_20722_25
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38049..39530
DNA (1482bp) protein (494aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYR8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04091.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
xylulokinase
SCN_reactora_scaffold_20722_26
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39562..40890
DNA (1329bp) protein (443aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Xylose isomerase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYR9_9PORP
xylA; xylose isomerase
SCN_reactora_scaffold_20722_27
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40981..42537
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYS0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04093.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
xylE; D-xylose transporter XylE
SCN_reactora_scaffold_20722_28
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42746..43375)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J216_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00272.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
RNA polymerase sigma factor
Displaying items 1-30 of 80 in total

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