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scn_reactorb_scaffold_105993

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_105993_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..827
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X408_DELAC
hypothetical protein
Type VI secretion protein {ECO:0000313|EMBL:KEH06960.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scn_reactorb_scaffold_105993_2
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1057..1653
DNA (597bp) protein (199aa)
ABC-type metal ion transport system, periplasmic component/surface adhesin n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWJ5_9BURK
Metal ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYC50635.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
scn_reactorb_scaffold_105993_3
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1661..2380
DNA (720bp) protein (240aa)
ABC transporter-like protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWJ6_9BURK
ABC transporter-like protein {ECO:0000313|EMBL:EGI75844.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
ABC transporter-like protein
scn_reactorb_scaffold_105993_4
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2377..3648
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWJ7_9BURK
Peptide ABC transporter permease {ECO:0000313|EMBL:EYC50633.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
hypothetical protein
scn_reactorb_scaffold_105993_5
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3653..4213
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWJ8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI75846.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
hypothetical protein
scn_reactorb_scaffold_105993_6
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4257..5204)
DNA (948bp) protein (316aa)
metal ABC transporter substrate-binding protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003955828
periplasmic solute-binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ABM59113.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scn_reactorb_scaffold_105993_7
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5201..6091)
DNA (891bp) protein (297aa)
zinc ABC transporter permease n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958280
ABC-3 protein
ABC-3 protein {ECO:0000313|EMBL:ABM59112.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scn_reactorb_scaffold_105993_8
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6088..6807)
DNA (720bp) protein (240aa)
ABC transporter n=1 Tax=Comamonas sp. B-9 RepID=UPI00039596C3
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABM59111.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scn_reactorb_scaffold_105993_9
unknown

Not on your lists

comp(6804..6944)
DNA (141bp) protein (47aa)

This feature has no annotations

scn_reactorb_scaffold_105993_10
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6949..7329)
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Prevotella nigrescens RepID=F9DE42_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EGQ11739.1}; TaxID=997352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens ATCC 33563.;"
hypothetical protein
scn_reactorb_scaffold_105993_11
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7326..7931)
DNA (606bp) protein (202aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZC03_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74792.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
scn_reactorb_scaffold_105993_12
unknown

Not on your lists

comp(7951..8607)
DNA (657bp) protein (219aa)

This feature has no annotations

scn_reactorb_scaffold_105993_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8604..13388)
DNA (4785bp) protein (1595aa)
CobN/magnesium chelatase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IVC3_CYCMS
CobN/magnesium chelatase {ECO:0000313|EMBL:AEL27922.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
CobN/magnesium chelatase
scn_reactorb_scaffold_105993_14
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13468..15750
DNA (2283bp) protein (761aa)
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI000349D99A
TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein
TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein {ECO:0000313|EMBL:AFY51142.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
scn_reactorb_scaffold_105993_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15780..16223)
DNA (444bp) protein (148aa)
Fur family transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958120
Ferric uptake regulator family protein {ECO:0000313|EMBL:EKF44376.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ferric uptake regulator family protein
scn_reactorb_scaffold_105993_16
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16491..16880
DNA (390bp) protein (130aa)
Ferric uptake regulator family protein n=2 Tax=Burkholderia pseudomallei RepID=S5NN46_BURPE
ferric uptake regulator family protein
Putative ferric uptake regulator, Fur family protein {ECO:0000313|EMBL:AEA62639.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
scn_reactorb_scaffold_105993_17
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16923..17228
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Acinetobacter calcoaceticus NIPH 13 RepID=N8N9L1_ACICA
Uncharacterized protein {ECO:0000313|EMBL:KIZ49841.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
Putative GTPases (G3E family)
scn_reactorb_scaffold_105993_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17248..18042
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X900_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41662.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
cobW/HypB/UreG, nucleotide-binding domain protein
scn_reactorb_scaffold_105993_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18124..19038
DNA (915bp) protein (305aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
GTP cyclohydrolase FolE2 n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WPH1_DELAC
type I GTP cyclohydrolase folE2 family protein
scn_reactorb_scaffold_105993_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19035..20201
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XQA2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41664.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scn_reactorb_scaffold_105993_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20198..21604
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
cysS; cysS: cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUH5_DELAC
scn_reactorb_scaffold_105993_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21601..21858
DNA (258bp) protein (86aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WQT8_DELAC
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hemolytic domain protein
scn_reactorb_scaffold_105993_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21855..22415
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X904_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41667.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
bacterial transferase hexapeptide family protein
scn_reactorb_scaffold_105993_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22440..23168
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WPH7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41668.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
glcNAc-PI de-N-acetylase family protein
scn_reactorb_scaffold_105993_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23165..25210
DNA (2046bp) protein (682aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
thrS; thrS: threonine--tRNA ligase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XQA7_DELAC
scn_reactorb_scaffold_105993_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25207..26604
DNA (1398bp) protein (466aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUI3_DELAC
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scn_reactorb_scaffold_105993_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26597..27031
DNA (435bp) protein (145aa)
Fur family transcriptional regulator, ferric uptake regulator n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WQU5_DELAC
Fur family transcriptional regulator, ferric uptake regulator {ECO:0000313|EMBL:EPD41671.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ferric uptake regulator family protein
scn_reactorb_scaffold_105993_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27051..27554
DNA (504bp) protein (168aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|SAAS:SAAS00103216}; EC=3.5.4.19 {ECO:0000256|SAAS:SAAS00103216};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X909_DELAC
phosphoribosyl-AMP cyclohydrolase
scn_reactorb_scaffold_105993_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27591..28085
DNA (495bp) protein (165aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIJ7_ACIET
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO26441.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
LysR family transcriptional regulator
scn_reactorb_scaffold_105993_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28028..28198
DNA (171bp) protein (57aa)
LysR substrate-binding protein n=2 Tax=Proteobacteria RepID=E8TV38_ALIDB
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADV00570.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying items 1-30 of 37 in total

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