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scn_reactorb_scaffold_35422

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_35422_1
unknown

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

scn_reactorb_scaffold_35422_2
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219..581
DNA (363bp) protein (121aa)
pilus biosynthesis protein PilZ n=1 Tax=Acidovorax radicis RepID=UPI0002377EE7
type IV pilus assembly PilZ
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scn_reactorb_scaffold_35422_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(632..739)
DNA (108bp) protein (36aa)
Transposase mutator type n=1 Tax=Comamonas testosteroni S44 RepID=D8D6C8_COMTE
Transposase mutator type {ECO:0000313|EMBL:EFI61495.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
transposase mutator type
scn_reactorb_scaffold_35422_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(804..2291)
DNA (1488bp) protein (496aa)
ribonuclease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365D9B5
Rne/Rng family ribonuclease
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:AEB84720.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_35422_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2428..3264)
DNA (837bp) protein (279aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AEB84719.1}; EC=2.1.1.107 {ECO:0000313|EMBL:AEB84719.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Uroporphyrin-III C-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0G7_ALIDB
uroporphyrin-III C-methyltransferase
scn_reactorb_scaffold_35422_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3478..5199
DNA (1722bp) protein (574aa)
Hydroxylamine reductase {ECO:0000313|EMBL:ACM33174.1}; EC=1.7.99.1 {ECO:0000313|EMBL:ACM33174.1};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
hydroxylamine reductase (EC:1.7.99.1)
Dissimilatory nitrite reductase (NO-forming), cytochrome cd1 type apoprotein n=2 Tax=Acidovorax RepID=A1W767_ACISJ
scn_reactorb_scaffold_35422_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5221..5577
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ35_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33173.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_35422_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5574..6785
DNA (1212bp) protein (404aa)
protein nirF n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036419D2
Cytochrome d1, heme region {ECO:0000313|EMBL:GAD22025.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cytochrome d1 heme subunit
scn_reactorb_scaffold_35422_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6810..7832
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0G3_ALIDB
hypothetical protein
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAO23491.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_35422_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7886..8371
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBD9_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84715.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_35422_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8361..8840
DNA (480bp) protein (160aa)
protein nirH n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BD0CE
Transcriptional regulator {ECO:0000313|EMBL:GAD22022.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
AsnC family transcriptional regulator
scn_reactorb_scaffold_35422_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8845..10065
DNA (1221bp) protein (407aa)
radical SAM protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A005E
Radical SAM domain-containing protein {ECO:0000313|EMBL:GAD22021.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
radical SAM domain-containing protein
scn_reactorb_scaffold_35422_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10058..11755
DNA (1698bp) protein (566aa)
Cytochrome d1 heme region n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ29_ACIET
cytochrome d1 heme region
Cytochrome d1 heme region {ECO:0000313|EMBL:ACM33167.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_35422_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11752..12369
DNA (618bp) protein (206aa)
putative cytochrome c oxidase subunit 3 (EC:1.9.3.1)
cytochrome C oxidase n=1 Tax=Acidovorax radicis RepID=UPI00023754E1
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EER58931.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scn_reactorb_scaffold_35422_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12448..12717
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023754E0
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scn_reactorb_scaffold_35422_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12827..13261
DNA (435bp) protein (145aa)
cytochrome C n=1 Tax=Acidovorax radicis RepID=UPI00023754DF
putative nitric-oxide reductase subunit C
Tax=CG_Rhodof_02
scn_reactorb_scaffold_35422_17
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13278..14771
DNA (1494bp) protein (498aa)
nitric oxide reductase n=1 Tax=Acidovorax radicis RepID=UPI00023754DE
cytochrome c oxidase subunit I
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:ACB33736.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scn_reactorb_scaffold_35422_18
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14848..15654
DNA (807bp) protein (269aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7Z3_LEPCP
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ACB33735.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scn_reactorb_scaffold_35422_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15730..17577
DNA (1848bp) protein (616aa)
Nitric oxide reductase activation protein NorD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HM22_RUBGI
norD; nitric oxide reductase activation protein NorD
Nitric oxide reductase activation protein NorD {ECO:0000313|EMBL:BAL94059.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
scn_reactorb_scaffold_35422_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17785..18528
DNA (744bp) protein (248aa)
Cyclic nucleotide-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F9_ALIDB
cyclic nucleotide-binding protein
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:GAO23495.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_35422_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18693..19298)
DNA (606bp) protein (202aa)
Maf-like protein Alide_2154 n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F8_ALIDB
maf protein
Maf-like protein ALISP_3316 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_35422_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19348..19815)
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Acidovorax RepID=K0I1P9_9BURK
rRNA large subunit methyltransferase
scn_reactorb_scaffold_35422_23
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19833..20579)
DNA (747bp) protein (249aa)
Ribosomal silencing factor RsfS n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ25_ACIET
iojap-like protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_35422_24
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20760..21704)
DNA (945bp) protein (315aa)
coproporphyrinogen III oxidase (EC:1.3.3.3)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS25_ACIAC
scn_reactorb_scaffold_35422_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21704..22984)
DNA (1281bp) protein (427aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000376EED3
scn_reactorb_scaffold_35422_26
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23013..23732)
DNA (720bp) protein (240aa)
Probable transcriptional regulatory protein HGR_00425 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNU0_9BURK
Probable transcriptional regulatory protein AX13_00585 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein
scn_reactorb_scaffold_35422_27
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23975..25492
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1Q3_9BURK
ATP-binding protein {ECO:0000313|EMBL:KJA12425.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scn_reactorb_scaffold_35422_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25562..26311
DNA (750bp) protein (250aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5S9_CLOSW
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADL05262.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
scn_reactorb_scaffold_35422_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26308..27594
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUF6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96643.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
scn_reactorb_scaffold_35422_30
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27897..29273)
DNA (1377bp) protein (459aa)
Metallophosphoesterase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQI8_9BURK
Metallophosphoesterase {ECO:0000313|EMBL:EGJ10606.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative metallophosphoesterase
Displaying items 1-30 of 113 in total

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