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scn_reactorb_scaffold_116778

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Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_116778_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213..1322
DNA (1110bp) protein (370aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W1Y3_ACISJ
scn_reactorb_scaffold_116778_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1405..3975
DNA (2571bp) protein (857aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002377897
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scn_reactorb_scaffold_116778_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4404..4934)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7F4_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59587.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scn_reactorb_scaffold_116778_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5097..6083
DNA (987bp) protein (329aa)
rdgC; recombination associated protein id=12552891 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rdgC; recombination associated protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_116778_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6096..7349
DNA (1254bp) protein (418aa)
Nucleoside recognition domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W1Z3_ACISJ
nucleoside recognition domain-containing protein
Nucleoside recognition domain protein {ECO:0000313|EMBL:ABM40268.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_116778_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7747..8058
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=B9M9U9_ACIET
hypothetical protein
Glutathione peroxidase {ECO:0000313|EMBL:GAO25755.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_116778_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8171..9337)
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T985_ACIDE
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJA10964.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
acyl-CoA dehydrogenase
scn_reactorb_scaffold_116778_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9398..10588)
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADV01621.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ADV01621.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Acetyl-CoA acetyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTN5_ALIDB
scn_reactorb_scaffold_116778_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10602..11384)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003783347
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:GAD21248.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
enoyl-CoA hydratase/isomerase
scn_reactorb_scaffold_116778_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11446..13245)
DNA (1800bp) protein (600aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEB86576.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEB86576.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6W4_ALIDK
scn_reactorb_scaffold_116778_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13242..14063)
DNA (822bp) protein (274aa)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTN7_ALIDB
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEB86577.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_116778_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14077..15255)
DNA (1179bp) protein (393aa)
Extracellular ligand-binding receptor n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTN8_ALIDB
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO25192.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_116778_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15273..16310)
DNA (1038bp) protein (346aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6W7_ALIDK
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB86579.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_116778_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16323..17201)
DNA (879bp) protein (293aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TTP0_ALIDB
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB86580.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_116778_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17201..18067)
DNA (867bp) protein (289aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTP1_ALIDB
ABC transporter related protein {ECO:0000313|EMBL:ADV01627.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_116778_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18200..18910
DNA (711bp) protein (237aa)
Regulatory protein TetR n=2 Tax=Alicycliphilus denitrificans RepID=E8TTP2_ALIDB
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:GAO25196.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_116778_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19009..19935
DNA (927bp) protein (309aa)
Putative amino acid metabolite efflux pump n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J3M5_COMT2
putative amino acid metabolite efflux pump
Putative amino acid metabolite efflux pump {ECO:0000313|EMBL:ACY34219.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
scn_reactorb_scaffold_116778_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20010..20411
DNA (402bp) protein (134aa)
glyoxalase n=1 Tax=Acidovorax radicis RepID=UPI00023785C7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_116778_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20393..21052)
DNA (660bp) protein (220aa)
Transcriptional regulator, AraC family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTV5_RUBGI
AraC family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scn_reactorb_scaffold_116778_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21227..21619)
DNA (393bp) protein (131aa)
Cu(I)-responsive transcriptional regulator n=2 Tax=Alicycliphilus denitrificans RepID=E8TRB1_ALIDB
MerR family transcriptional regulator
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:ADU97822.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_116778_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21616..21813)
DNA (198bp) protein (66aa)
Heavy metal transport/detoxification protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W1Z9_ACISJ
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABM40274.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_116778_22
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21970..24279
DNA (2310bp) protein (770aa)
Heavy metal translocating P-type ATPase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9V5_ACIET
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACM31526.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
heavy metal translocating p-type ATPase
scn_reactorb_scaffold_116778_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24437..26038
DNA (1602bp) protein (534aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q089_ACIAP
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADX43972.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_116778_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26111..29185)
DNA (3075bp) protein (1025aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAB1_ACIDE
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EER58584.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
CzcA family heavy metal efflux pump
scn_reactorb_scaffold_116778_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29182..30363)
DNA (1182bp) protein (394aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBZ1_ALIDK
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEB82485.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_116778_26
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30425..31684)
DNA (1260bp) protein (420aa)
Outer membrane efflux protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRB7_ALIDB
Outer membrane efflux protein {ECO:0000313|EMBL:GAO25764.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
outer membrane efflux protein
scn_reactorb_scaffold_116778_27
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31743..32444
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q095_ACIAP
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADX43978.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_116778_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32441..33853
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBZ4_ALIDK
integral membrane sensor signal transduction histidine kinase
scn_reactorb_scaffold_116778_29
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33964..35370
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZTZ0_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO97803.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
ATPase-like protein
scn_reactorb_scaffold_116778_30
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35374..36048
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NBQ2_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Displaying items 1-30 of 148 in total

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