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scn_reactorb_scaffold_88414

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_88414_1
Burkholderia sp. JS667, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296..487)
DNA (192bp) protein (64aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=622617 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. JS667.;"
4-oxalocrotonate tautomerase n=1 Tax=Burkholderia sp. JS667 RepID=C3UVD3_9BURK
4-oxalocrotonate tautomerase
scn_reactorb_scaffold_88414_2
Comamonas sp. JS765, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(515..1303)
DNA (789bp) protein (263aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
4-oxalocrotonate decarboxylase n=1 Tax=Comamonas sp. JS765 RepID=Q9F9I2_9BURK
4-oxalocrotonate decarboxylase {ECO:0000313|EMBL:AAG17138.1}; TaxID=58226 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. JS765.;"
scn_reactorb_scaffold_88414_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1346..2590)
DNA (1245bp) protein (415aa)
Putative substrate-binding component of ABC transporter n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F7V3_9RHIZ
ABC transporter {ECO:0000313|EMBL:GAN77935.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter substrate-binding protein
scn_reactorb_scaffold_88414_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2587..3921)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036019D4
aerotaxis receptor Aer
Aerotaxis receptor Aer {ECO:0000313|EMBL:CDM23332.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scn_reactorb_scaffold_88414_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3937..4965)
DNA (1029bp) protein (343aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
4-hydroxy-2-oxovalerate aldolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUP0_ALIDB
scn_reactorb_scaffold_88414_6
Diaphorobacter sp. J5-51, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4980..5888)
DNA (909bp) protein (303aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01657}; TaxID=680496 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source="Diaphorobacter sp. J5-51.;"
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase n=1 Tax=Diaphorobacter sp. J5-51 RepID=K4K4B5_9BURK
scn_reactorb_scaffold_88414_7
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5910..6704)
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Bacteria RepID=C6KUK4_9BACT
Probable short-chain dehydrogenase {ECO:0000313|EMBL:BAB62055.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
Short-chain dehydrogenase/reductase SDR
scn_reactorb_scaffold_88414_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6716..7498)
DNA (783bp) protein (261aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
2-oxopent-4-enoate hydratase {ECO:0000313|EMBL:AEB82710.1}; EC=4.2.1.80 {ECO:0000313|EMBL:AEB82710.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-oxopent-4-enoate hydratase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN8_ALIDB
scn_reactorb_scaffold_88414_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7612..9072)
DNA (1461bp) protein (487aa)
2-hydroxymuconic semialdehyde dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUN6_ALIDB
2-hydroxymuconic semialdehyde dehydrogenase
2-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:GAO21634.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_88414_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9268..10152)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEJ2_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB82707.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_88414_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10165..10596)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN4_ALIDB
hypothetical protein
CadD {ECO:0000313|EMBL:GAO26013.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_88414_12

Not on your lists

comp(10596..11522)
DNA (927bp) protein (309aa)
catechol 2,3 dioxygenase (EC:1.13.11.2)
Catechol 2,3-dioxygenase n=1 Tax=uncultured bacterium RepID=C6KUJ4_9BACT
Catechol 2,3-dioxygenase {ECO:0000313|EMBL:BAH89647.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scn_reactorb_scaffold_88414_13
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11549..11884)
DNA (336bp) protein (112aa)
Plant-type ferredoxin n=1 Tax=Pseudomonas putida RepID=Q93JX0_PSEPU
Plant-type ferredoxin {ECO:0000313|EMBL:BAB62049.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
ferredoxin
scn_reactorb_scaffold_88414_14
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12035..12652)
DNA (618bp) protein (206aa)
AfpU n=1 Tax=Alcaligenes faecalis RepID=A8CYC3_ALCFA
AfpU {ECO:0000313|EMBL:ABV30926.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein
scn_reactorb_scaffold_88414_15

Not on your lists

12779..13657
DNA (879bp) protein (293aa)
LysR family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6KUJ8_9BACT
LysR family transcriptional regulator {ECO:0000313|EMBL:BAH89645.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
LysR family transcriptional regulator
scn_reactorb_scaffold_88414_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13679..14749)
DNA (1071bp) protein (357aa)
phenol 2-monooxygenase (EC:1.14.13.7)
Oxidoreductase FAD-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN1_ALIDB
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:ADU98107.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_88414_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14911..15267)
DNA (357bp) protein (119aa)
Phenol hydroxylase conserved region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN0_ALIDB
phenol hydroxylase
Phenol hydroxylase conserved region {ECO:0000313|EMBL:AEB82702.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_88414_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15284..16831)
DNA (1548bp) protein (516aa)
Phenol 2-monooxygenase {ECO:0000313|EMBL:AEB82701.1}; EC=1.14.13.7 {ECO:0000313|EMBL:AEB82701.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEI6_ALIDK
scn_reactorb_scaffold_88414_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16858..17127)
DNA (270bp) protein (90aa)
Monooxygenase component MmoB/DmpM n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM8_ALIDB
monooxygenase component mmob/dmpm
Monooxygenase component MmoB/DmpM {ECO:0000313|EMBL:GAO21642.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_88414_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17144..18136)
DNA (993bp) protein (331aa)
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase {ECO:0000313|EMBL:AEB82699.1}; EC=1.14.13.7 {ECO:0000313|EMBL:AEB82699.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Phenol 2-monooxygenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEI4_ALIDK
scn_reactorb_scaffold_88414_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18175..18474)
DNA (300bp) protein (100aa)
Phenol hydroxylase subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM6_ALIDB
phenol hydroxylase subunit
Phenol hydroxylase subunit {ECO:0000313|EMBL:GAO21644.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_88414_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18760..20469
DNA (1710bp) protein (570aa)
Sigma-54 factor interaction domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM5_ALIDB
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADU98101.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_88414_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20470..21201
DNA (732bp) protein (244aa)
Regulatory protein GntR HTH n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUM4_ALIDB
GntR family transcriptional regulator
Regulatory protein GntR HTH {ECO:0000313|EMBL:ADU98100.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_88414_24
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21253..22113)
DNA (861bp) protein (287aa)
peptidase M48 n=1 Tax=Acidovorax avenae RepID=UPI000360E203
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABM30887.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scn_reactorb_scaffold_88414_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22161..23099)
DNA (939bp) protein (313aa)
DME family drug/metabolite transporter n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFY0_DELAC
hypothetical protein
DME family drug/metabolite transporter {ECO:0000313|EMBL:EPD38648.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scn_reactorb_scaffold_88414_26
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23180..25381)
DNA (2202bp) protein (734aa)
TonB-dependent siderophore receptor n=1 Tax=Acidovorax sp. CF316 RepID=J1EK00_9BURK
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJE52606.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
TonB-dependent siderophore receptor
scn_reactorb_scaffold_88414_27
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25419..25628)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U911_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE52607.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scn_reactorb_scaffold_88414_28
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25625..26764)
DNA (1140bp) protein (380aa)
Pepsy-associated tm helix domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZQ0_9BURK
pepsy-associated tm helix domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scn_reactorb_scaffold_88414_29
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27020..28429)
DNA (1410bp) protein (470aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Acidovorax sp. CF316 RepID=J0KJP0_9BURK
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJE51408.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
NodT family RND efflux system outer membrane lipoprotein
scn_reactorb_scaffold_88414_30
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28438..30441)
DNA (2004bp) protein (668aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
phosphonate-transporting ATPase (EC:3.6.3.28)
Macrolide export ATP-binding/permease MacB n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WT81_DELAC
Displaying items 1-30 of 38 in total

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