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scn_reactorb_scaffold_20309

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_20309_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

scn_reactorb_scaffold_20309_2
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(427..1284)
DNA (858bp) protein (286aa)
transposase IS1246 n=1 Tax=Acidovorax avenae RepID=UPI0002EF021D
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADX45335.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_20309_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1794..2780
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1G1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38331.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scn_reactorb_scaffold_20309_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2905..3999
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8PY46_PSEAI
transposase of ISThsp18, IS1182 family
Transposase of ISThsp18, IS1182 family {ECO:0000313|EMBL:CAZ88666.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scn_reactorb_scaffold_20309_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4306..5130)
DNA (825bp) protein (275aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4T1_9BURK
scn_reactorb_scaffold_20309_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5183..6862)
DNA (1680bp) protein (560aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Acidovorax sp. CF316 RepID=J0U3J3_9BURK
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJE50692.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
AMP-dependent synthetase and ligase
scn_reactorb_scaffold_20309_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7001..7735)
DNA (735bp) protein (245aa)
UPI0003A5C121 related cluster n=1 Tax=unknown RepID=UPI0003A5C121
Uncharacterized protein {ECO:0000313|EMBL:GAD23355.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_20309_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7881..8945)
DNA (1065bp) protein (355aa)
fructose-bisphosphate aldolase, class II, calvin cycle subtype (EC:4.1.2.13)
fructose-bisphosphate aldolase id=12550802 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_20309_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9058..10494)
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=2 Tax=Delftia acidovorans RepID=S2WAW1_DELAC
scn_reactorb_scaffold_20309_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10675..11277)
DNA (603bp) protein (201aa)
Peptide chain release factor n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WXG3_DELAC
Peptide chain release factor {ECO:0000313|EMBL:EPD37502.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
peptide chain release factor H
scn_reactorb_scaffold_20309_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11268..12431)
DNA (1164bp) protein (388aa)
Release factor H-coupled RctB family protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0M1_COMTE
Release factor H-coupled RctB family protein {ECO:0000313|EMBL:EED66371.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
release factor H-coupled RctB family protein
scn_reactorb_scaffold_20309_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12730..14112)
DNA (1383bp) protein (461aa)
Peptidase M24 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAQ0_ACIDE
Peptidase M24 {ECO:0000313|EMBL:EER58444.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peptidase M24
scn_reactorb_scaffold_20309_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14109..14867)
DNA (759bp) protein (253aa)
nucleotidyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036484A6
Nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:GAD23350.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
nucleotidyl transferase
scn_reactorb_scaffold_20309_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14864..15505)
DNA (642bp) protein (214aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTX0_COMTE
chemotaxis protein CheY
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EED69241.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
scn_reactorb_scaffold_20309_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15502..16590)
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
Histidine kinase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTW9_COMTE
nodulation protein
scn_reactorb_scaffold_20309_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16699..17427)
DNA (729bp) protein (243aa)
MgtC/SapB transporter n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTW8_COMTE
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AIJ45090.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
scn_reactorb_scaffold_20309_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17465..20200)
DNA (2736bp) protein (912aa)
Magnesium-translocating P-type ATPase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTW7_COMTE
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EED69238.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
magnesium-transporting ATPase
scn_reactorb_scaffold_20309_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20240..20539)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTW3_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED69234.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
scn_reactorb_scaffold_20309_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20855..21565)
DNA (711bp) protein (237aa)
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035C444B
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACS21593.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scn_reactorb_scaffold_20309_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21572..24334)
DNA (2763bp) protein (921aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00036A4596
osmosensitive K channel His kinase sensor
scn_reactorb_scaffold_20309_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24369..24962)
DNA (594bp) protein (198aa)
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000255|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Potassium-transporting ATPase C chain n=1 Tax=Variovorax paradoxus (strain S110) RepID=ATKC_VARPS
scn_reactorb_scaffold_20309_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24974..27070)
DNA (2097bp) protein (699aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Potassium-transporting ATPase B chain n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CPD3_VARPS
K+-transporting ATPase subunit beta
scn_reactorb_scaffold_20309_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27078..28883)
DNA (1806bp) protein (602aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Potassium-transporting ATPase A chain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVI3_VARPE
scn_reactorb_scaffold_20309_24
unknown

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comp(28886..28981)
DNA (96bp) protein (32aa)

This feature has no annotations

scn_reactorb_scaffold_20309_25
unknown

Not on your lists

comp(28981..29085)
DNA (105bp) protein (35aa)

This feature has no annotations

scn_reactorb_scaffold_20309_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29290..31362
DNA (2073bp) protein (691aa)
transketolase id=12551754 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Transketolase {ECO:0000313|EMBL:EER59234.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
transketolase
scn_reactorb_scaffold_20309_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31397..32395
DNA (999bp) protein (333aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] id=12551755 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_20309_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32522..32875)
DNA (354bp) protein (118aa)
ribosomal subunit Interface protein id=12551758 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribosomal subunit Interface protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_20309_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33154..33624)
DNA (471bp) protein (157aa)
Peptidylprolyl isomerase, FKBP-type n=2 Tax=Alicycliphilus denitrificans RepID=E8TWY0_ALIDB
peptidylprolyl isomerase, fkbp-type
Peptidylprolyl isomerase, FKBP-type {ECO:0000313|EMBL:ADV01883.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_20309_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33847..34953)
DNA (1107bp) protein (369aa)
Pirin domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQE4_DELAS
pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:ABX33554.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying items 1-30 of 42 in total

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