ggKbase home page

scn_reactorb_scaffold_39970

Search features with annotation key words

Displaying items 1-30 of 249 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_39970_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(403..1722)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376311
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scn_reactorb_scaffold_39970_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1771..2085)
DNA (315bp) protein (105aa)
hypothetical protein; K06940 id=12550218 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_39970_3
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2174..2518
DNA (345bp) protein (115aa)
FeoA family protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLB4_ACIAC
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:ABM31752.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scn_reactorb_scaffold_39970_4
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2515..4398
DNA (1884bp) protein (628aa)
Ferrous iron transport protein B n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLB5_ACIAC
ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:ABM31753.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scn_reactorb_scaffold_39970_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4402..4599
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QCV2_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX45095.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_39970_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4697..6142)
DNA (1446bp) protein (482aa)
aspartate ammonia-lyase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000366D8D7
fumarate lyase
Fumarate lyase {ECO:0000313|EMBL:GAD23453.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scn_reactorb_scaffold_39970_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6356..7294)
DNA (939bp) protein (313aa)
ornithine carbamoyltransferase (EC:2.1.3.3) id=12550216 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ornithine carbamoyltransferase (EC:2.1.3.3)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_39970_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7291..8487)
DNA (1197bp) protein (399aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
acetylornithine aminotransferase (EC:2.6.1.11)
acetylornithine aminotransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DE9DF
scn_reactorb_scaffold_39970_9
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8993..9319
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IDL2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJA10449.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scn_reactorb_scaffold_39970_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9471..9770)
DNA (300bp) protein (100aa)
30S ribosomal protein S20 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361335E
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
30S ribosomal protein S20
scn_reactorb_scaffold_39970_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9795..11438
DNA (1644bp) protein (548aa)
Integral membrane protein MviN n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8S2_ACIDE
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
integral membrane protein MviN
scn_reactorb_scaffold_39970_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11492..12340
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I320_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47417.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_39970_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12344..12733)
DNA (390bp) protein (130aa)
universal stress protein UspA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000360B4E9
Uspa domain-containing protein {ECO:0000313|EMBL:GAD20873.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
UspA domain-containing protein
scn_reactorb_scaffold_39970_14
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12852..13832)
DNA (981bp) protein (327aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Acidovorax sp. CF316 RepID=J0UER8_9BURK
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJE54612.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ThiJ/PfpI domain-containing protein
scn_reactorb_scaffold_39970_15
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13829..14401)
DNA (573bp) protein (191aa)
Isochorismatase hydrolase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q899_ACIAP
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADX47097.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_39970_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14525..15562)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA55_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43130.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_39970_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15572..16612)
DNA (1041bp) protein (347aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBK0_ALIDK
scn_reactorb_scaffold_39970_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16863..17570
DNA (708bp) protein (236aa)
DnaA regulatory inactivator Hda n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD9_ALIDB
dnaa regulatory inactivator hda
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:AEB85843.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_39970_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17580..18365
DNA (786bp) protein (262aa)
HAD family hydrolase id=12550203 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
had-superfamily subfamily ib hydrolase, tigr01490
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_39970_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18362..19924
DNA (1563bp) protein (521aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
poly(A) polymerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036846A1
poly(A) polymerase
scn_reactorb_scaffold_39970_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19905..20399
DNA (495bp) protein (165aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE2_ALIDB
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:GAO27302.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_39970_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20554..21534
DNA (981bp) protein (327aa)
Glycosyl transferase family 2 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBJ4_ALIDK
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEB85839.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_39970_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21531..23132
DNA (1602bp) protein (534aa)
Glycosyl transferase family 39 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBJ3_ALIDK
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:AEB85838.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_39970_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23086..23454)
DNA (369bp) protein (123aa)
GtrA family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSE5_ALIDB
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:ADU99168.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_39970_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23488..24369
DNA (882bp) protein (294aa)
YdjC family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE6_ALIDB
hypothetical protein
YdjC family protein {ECO:0000313|EMBL:GAO27306.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_39970_26
unknown

Not on your lists

comp(24410..24985)
DNA (576bp) protein (192aa)

This feature has no annotations

scn_reactorb_scaffold_39970_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25124..26095)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE7_ALIDB
hypothetical protein
Extracytoplasmic binding receptor {ECO:0000313|EMBL:GAO27307.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_39970_28
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26110..27162)
DNA (1053bp) protein (351aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRM1_9BURK
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EER58666.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
CDP-6-deoxy-delta-3,4-glucoseen reductase
scn_reactorb_scaffold_39970_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27211..28125
DNA (915bp) protein (305aa)
TrkA-N domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSF3_ALIDB
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:AEB85829.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_39970_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28144..29064)
DNA (921bp) protein (307aa)
Inositol monophosphatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U281_ALIDB
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:GAO26994.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying items 1-30 of 249 in total

View Taxonomy