ggKbase home page

scn_reactorb_scaffold_14857_16

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 17107..18813

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 554.0
  • Bit_score: 922
  • Evalue 1.90e-265
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 556.0
  • Bit_score: 913
  • Evalue 2.40e-263
2-isopropylmalate synthase n=1 Tax=Acidovorax sp. CF316 RepID=J0K1X2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 554.0
  • Bit_score: 922
  • Evalue 1.40e-265

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
GTGATCGACCAACCGTCCCGCAAGTACCAGACCGCCGCCCCCATCGCCCTCGCGGACCGCCGCTGGCCCGCCAACACCATCACCCGCGCGCCCGTGTGGCTCTCCACCGACCTGCGCGACGGCAACCAGGCGCTGTTCGAGCCCATGAACGGCGCGCGCAAGATGAAGCTGTTCCAGGAGCTGGTGCGCATCGGCTTCAAGGAGATCGAGGTGGGCTTTCCCGCCGCCTCGCAGACCGACTTCGACTTCGTGCGCCGCCTCATCGACGAAGACCTGGTGCCCGAGGACGTGACCCTCATGGTCATGACGCAGTCGCGCAGCGACCTCATCGAGCGCACCGTCGAGGCGCTGCGCGGCGCGCCCCGCGCCATCGTGCACCTGTACAACGCCACCGCCCCCATCTGGCGCCGCGTGGTGTTCGGCATGAACGTGACGCAGATGCTGGCCTTCATCGAGGAACACGTCGCGCACCTCAAGCGCCTGACCGACGCGCGGCCCGAGACGCGGTGGACGCTGCAGTACTCGCCCGAGACCTTCAACGCCACCGAGCTGGAGGTGTCGCTCAAGGCCTGCCAGACCGCGCTTGCCGCCTGGGGCGCAGGCCCGGGGCGCGAGGTCATCATCAACTTGCCCACCACGGTGGAGAACGCCACGCCCAACCGCTTCGCCGACCAGATCGAGTGGATGCACCGCCACCTCGCGCCGCGCGAGCACATCGTGCTCTCGGTGCACCCGCACAACGACCGCGGCACCGGCGTGGCGGCGGCCGAACTGGCCTTGCTGGCCGGCGCGCAGCGCGTGGAGGGCTGCCTGTTCGGCAACGGCGAGCGCTGCGGCAACCTCGACCTGGTGACGGTGGCGCTGAACCTCTACACCCAGGGCGTGCATCCGGGCCTGGATTTTTCCGACATCAACGCCGTGGCGCGCGTGGCCGAGGAATGCACGGGCCTGCCCATCCACCCGCGCCACCCCTACGTGGGCGACCTGGTGTTCACCTCGTTCTCGGGCTCGCACCAGGACGCGATCAAGAAAGGCTTCGCCGCGCACGACCCCGAGGGCCCGTGGCAGATTCCGTACCTGCCCATCGACCCGGCGGACCTGGGCCGCACCTACGACAGCGTGATCCGCGTGAACAGCCAGTCGGGCAAGGGCGGCATCGCCTTCCTGCTGGAGCGCGACCAGGGCGTGGTCATGCCGCGGCGCATGCAGGTGGAGTTCAGCGCCGTGGTGCAGCGCGCCACCGACGCGAGTGAGACCGAGATGACCGGCGACGCCCTCTGGGCGCTGTTCCAGGCCACCTACCTGCGCCAGCCCCAGGGCGTGCCGGGCCTGGTGACGTACCACACGCACCGCCTGGCCGGCGACGGGCGCGGCATCGAGATCGACGTGGCGATCGACGGCGCCCGCCTCACGCTGCAGGGGCAGGGCAACGGCCCGATCGACGCGGCGGTGGACGCGCTGGGCCTGCCGCTGTCGGTGCACGCCTACGAGGAGCGCGCCACCGGCACCGGCGCGGGCGCGCAGGCGCTGGCCATCGTCGAAGCCGGGCTGGACGGCCTGCCCGGCGCCACCTTCGGCGTGGGCCTGCACCACAACATCGTCACCGCCTCGGTGCAGGCCGTGGTGGGCGCCGCCAACCGGCTGCTGCAGCGGCGCCACGCACAAGGGCACCAGGCCCCCGGAGCCCGGACCACGGCCATGGTTTGA
PROTEIN sequence
Length: 569
VIDQPSRKYQTAAPIALADRRWPANTITRAPVWLSTDLRDGNQALFEPMNGARKMKLFQELVRIGFKEIEVGFPAASQTDFDFVRRLIDEDLVPEDVTLMVMTQSRSDLIERTVEALRGAPRAIVHLYNATAPIWRRVVFGMNVTQMLAFIEEHVAHLKRLTDARPETRWTLQYSPETFNATELEVSLKACQTALAAWGAGPGREVIINLPTTVENATPNRFADQIEWMHRHLAPREHIVLSVHPHNDRGTGVAAAELALLAGAQRVEGCLFGNGERCGNLDLVTVALNLYTQGVHPGLDFSDINAVARVAEECTGLPIHPRHPYVGDLVFTSFSGSHQDAIKKGFAAHDPEGPWQIPYLPIDPADLGRTYDSVIRVNSQSGKGGIAFLLERDQGVVMPRRMQVEFSAVVQRATDASETEMTGDALWALFQATYLRQPQGVPGLVTYHTHRLAGDGRGIEIDVAIDGARLTLQGQGNGPIDAAVDALGLPLSVHAYEERATGTGAGAQALAIVEAGLDGLPGATFGVGLHHNIVTASVQAVVGAANRLLQRRHAQGHQAPGARTTAMV*