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scn_reactorb_scaffold_14857

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_14857_1
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..880
DNA (879bp) protein (293aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scn_reactorb_scaffold_14857_2
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1014..1304)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ6_RHOFD
hypothetical protein
Tax=CG_Rhodof_01
scn_reactorb_scaffold_14857_3
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1317..2345)
DNA (1029bp) protein (343aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ7_RHOFD
CRISPR-associated Cas1 family protein
Tax=CG_Rhodof_01
scn_reactorb_scaffold_14857_4
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2365..3003)
DNA (639bp) protein (213aa)
CRISPR-associated exonuclease, Cas4 family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ8_RHOFD
CRISPR-associated Cas4 family protein
CRISPR-associated exonuclease, Cas4 family {ECO:0000313|EMBL:ABD71605.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scn_reactorb_scaffold_14857_5
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3008..3868)
DNA (861bp) protein (287aa)
prophage antirepressor id=12550124 bin=BDI species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
prophage antirepressor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scn_reactorb_scaffold_14857_6

Not on your lists

comp(3880..4866)
DNA (987bp) protein (329aa)
CRISPR-associated protein, Csd2 family protein n=1 Tax=mine drainage metagenome RepID=E6PND3_9ZZZZ
CRISPR-associated protein, Csd2 family protein {ECO:0000313|EMBL:CBH96435.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
uncharacterized protein predicted to be involved in DNA repair
scn_reactorb_scaffold_14857_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4863..6614)
DNA (1752bp) protein (584aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ7_HALNC
CRISPR-associated protein Csd1 family
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ACX95670.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
scn_reactorb_scaffold_14857_8
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6611..7267)
DNA (657bp) protein (219aa)
CRISPR-associated protein Cas5 family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ8_HALNC
CRISPR-associated protein Cas5 family
Tax=GWA2_Gallionellales_60_18_curated
scn_reactorb_scaffold_14857_9

Not on your lists

comp(7277..9526)
DNA (2250bp) protein (750aa)
CRISPR-associated helicase Cas3 n=1 Tax=mine drainage metagenome RepID=E6PND0_9ZZZZ
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:CBH96432.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated helicase Cas3
scn_reactorb_scaffold_14857_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9996..11873
DNA (1878bp) protein (626aa)
Helicase c2 n=2 Tax=Alicycliphilus denitrificans RepID=E8TR92_ALIDB
DEAD/DEAH box helicase
Helicase c2 {ECO:0000313|EMBL:ADU97803.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_14857_11
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11935..13584)
DNA (1650bp) protein (550aa)
methyl-accepting chemotaxis protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B3D6CB
Methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACO75794.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
scn_reactorb_scaffold_14857_12
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13603..14796)
DNA (1194bp) protein (398aa)
Putative metal dependent phosphohydrolase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DDG3_LARHH
metal dependent phosphohydrolase
Putative metal dependent phosphohydrolase {ECO:0000313|EMBL:ACO75795.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
scn_reactorb_scaffold_14857_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15109..15465
DNA (357bp) protein (119aa)
Alkylphosphonate utilization operon protein PhnA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TB21_ACIDE
Alkylphosphonate utilization operon protein PhnA {ECO:0000313|EMBL:EER58324.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
alkylphosphonate utilization operon protein PhnA
scn_reactorb_scaffold_14857_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15471..16085
DNA (615bp) protein (205aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000380C120
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases {ECO:0000313|EMBL:GAD21235.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scn_reactorb_scaffold_14857_15
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16155..16856
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1E7R0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE48359.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
MOSC domain containing protein
scn_reactorb_scaffold_14857_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17107..18813
DNA (1707bp) protein (569aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Acidovorax sp. CF316 RepID=J0K1X2_9BURK
scn_reactorb_scaffold_14857_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18847..19341
DNA (495bp) protein (165aa)
NLP/P60 protein id=5081532 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
NLP/P60 protein
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying 17 items

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