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scn_reactorb_scaffold_9274_30

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 30875..31441

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQS2_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 186.0
  • Bit_score: 273
  • Evalue 1.50e-70
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 186.0
  • Bit_score: 273
  • Evalue 4.10e-71
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EZP47986.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 186.0
  • Bit_score: 273
  • Evalue 2.00e-70

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Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCCAAGCCGCCCCGCCCCTCCCGCCGTCTGGCTGGGCCTGGACCTGCGCTGGGCCTATGAAAGCCTGCTGCCCGCGATCTGGCGCAGCACGCGCTGCATCCAGCGCGCCCAGGACGTGCTGCACGACGCCTTCGTGCGCTACGCGCTCAGCGGCAGGCACGAAGCCATCGCCCAGCCGCACGCCTACCTGCGCGTGGTGGCGCGCTCCGTGCTGGCGGACCATCTGGCGCAGGAGCGCCGCTTCGTCCCCCTGCCCGACCAGGACGGCGAAAGCCACGGCGACAGGCACGACGGCGGCCCGGCCCCCCTGGCCGGACTGGAGTACGCCACCTACCACACCCCCTCCGCCGAAACCCTGGCCGAACTGCAGCAGCGCCTGGCCGCCGTGCAGCGCGCCATCGAAGGGCTGCCGCCGCGCTGCCGCGAAGTGTTCTGGCTGTGCCGCGTCGAAGGCCATACCCAGCCCGAGATCGCCCAGCGCCTGAACATCAGCCTGAACATGGTCGAGCGCCACATGATCCGCGCCCTGCTCGACCTGCGCGCCGCGCGCGAACTGCTCGCATGA
PROTEIN sequence
Length: 189
MPSRPAPPAVWLGLDLRWAYESLLPAIWRSTRCIQRAQDVLHDAFVRYALSGRHEAIAQPHAYLRVVARSVLADHLAQERRFVPLPDQDGESHGDRHDGGPAPLAGLEYATYHTPSAETLAELQQRLAAVQRAIEGLPPRCREVFWLCRVEGHTQPEIAQRLNISLNMVERHMIRALLDLRAARELLA*