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scn_reactorb_scaffold_19788_8

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 7546..8178

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUN9_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 186.0
  • Bit_score: 162
  • Evalue 3.10e-37
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 186.0
  • Bit_score: 162
  • Evalue 8.80e-38
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF87977.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 186.0
  • Bit_score: 162
  • Evalue 4.40e-37

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGACGCGTGATTCCCTTCCCAAAGCCGGGCGCGCCGCCCAAGACGGCGGCATCGAGCAGCAATTGGCCGACATGTACGGCCGCTGGCGCAGGCCGCTGATGCACATGCTGCGCCGGTTTCTTGGCACACCGGCCGAGGCGGAAGAGGCCGCCCAGGAAGTCTTTGCCCGCATGGCCTCGGCGGGCAAGGCCGTCACCCGGGACGAAGAACAACCCTACCTGGGCCAGGCCGCGCGCCACATTGCCATCGACCACTGGCGCAAGAGCGCGGCGCGGGGCGGCATCGAACTGGTGCCGCTCGACACCGCCCTGCATGACCCCGCAGCGCTGGCGGGCGCCGACGCCACCCTGGAGCAGGCCGAGCGCAACCAGTTCGTCGCGCGCCTCGACCAGGCCGTGCAGGAACTGCCCGCGCGCCAGCGCGAAGCCTTCATGCTCCACCGCATCGAAGGCCACACGGTGGAAGAAACCGCAGCGCACATGGGCATCTCCACGCGCATGGCCGTTAAGCACCTTGCGCGGGGCCTGGCCTACTGCCAGGTCCGCATCATGTATGCCAGCCTCGGGCAGATGCGGCAGTTGCATGCCCAGGACAGCGACACTGAGGCCCCCGCCGACGAACAACAACCATGA
PROTEIN sequence
Length: 211
MTRDSLPKAGRAAQDGGIEQQLADMYGRWRRPLMHMLRRFLGTPAEAEEAAQEVFARMASAGKAVTRDEEQPYLGQAARHIAIDHWRKSAARGGIELVPLDTALHDPAALAGADATLEQAERNQFVARLDQAVQELPARQREAFMLHRIEGHTVEETAAHMGISTRMAVKHLARGLAYCQVRIMYASLGQMRQLHAQDSDTEAPADEQQP*