ggKbase home page

scn_reactorb_scaffold_19788

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_19788_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..933)
DNA (933bp) protein (311aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EA2E9
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:GAD20894.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
acyl-CoA dehydrogenase domain-containing protein
scn_reactorb_scaffold_19788_2
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(973..2133)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4M1_LEPCP
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACB33460.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scn_reactorb_scaffold_19788_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2151..2933)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase/isomerase; K07536 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-] id=12553225 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
2-ketocyclohexanecarboxyl-CoA hydrolase (EC:4.1.3.36)
scn_reactorb_scaffold_19788_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2968..3735)
DNA (768bp) protein (256aa)
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] id=12553224 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_19788_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4045..5439)
DNA (1395bp) protein (465aa)
protease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D2EBF
Peptidase U32 {ECO:0000313|EMBL:GAD21375.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidase U32
scn_reactorb_scaffold_19788_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5524..6411)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003702516
Transcriptional regulator {ECO:0000313|EMBL:GAD21374.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
LysR family transcriptional regulator
scn_reactorb_scaffold_19788_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6526..7269
DNA (744bp) protein (248aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365ABB5
Predicted permeases {ECO:0000313|EMBL:GAD21373.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_19788_8
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7546..8178
DNA (633bp) protein (211aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUN9_DELSC
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF87977.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scn_reactorb_scaffold_19788_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8175..9200
DNA (1026bp) protein (342aa)
Anti-FecI sigma factor, FecR n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUP0_DELSC
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEF87978.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scn_reactorb_scaffold_19788_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9492..12047
DNA (2556bp) protein (852aa)
TonB-dependent siderophore receptor n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q6E3_ACIAP
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ADX45696.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_19788_11
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12051..12317
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TB5_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD85897.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scn_reactorb_scaffold_19788_12
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12319..12612
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TB6_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD85896.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scn_reactorb_scaffold_19788_13
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12620..14236
DNA (1617bp) protein (539aa)
Putative transmembrane protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TB7_NITEU
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAD85895.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scn_reactorb_scaffold_19788_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14242..14793)
DNA (552bp) protein (184aa)
chemotaxis protein CheY n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382E554
Two component Fis family transcriptional regulator {ECO:0000313|EMBL:GAD21372.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
two component Fis family transcriptional regulator
scn_reactorb_scaffold_19788_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14879..16210)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
histidine kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003778A1D
histidine kinase
scn_reactorb_scaffold_19788_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16194..16997)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F3B12
Uncharacterized protein {ECO:0000313|EMBL:GAD21370.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Surfeit locus 1 family protein
scn_reactorb_scaffold_19788_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16997..17419)
DNA (423bp) protein (141aa)
cytochrome C oxidase subunit III n=1 Tax=Acidovorax radicis RepID=UPI0002375BA5
cytochrome o ubiquinol oxidase subunit IV
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:AFU47067.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_19788_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17420..18031)
DNA (612bp) protein (204aa)
Cytochrome o ubiquinol oxidase, subunit III n=1 Tax=Acidovorax sp. CF316 RepID=J0UCB1_9BURK
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:EJE53807.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
cytochrome o ubiquinol oxidase subunit III
scn_reactorb_scaffold_19788_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18024..20033)
DNA (2010bp) protein (670aa)
cytochrome o ubiquinol oxidase subunit I (EC:1.9.3.1)
Cytochrome o ubiquinol oxidase, subunit I n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ28_ALIDB
Cytochrome o ubiquinol oxidase subunit I {ECO:0000313|EMBL:GAD21367.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scn_reactorb_scaffold_19788_20
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20026..21039)
DNA (1014bp) protein (338aa)
Ubiquinol oxidase subunit 2 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAW0_9BURK
Cytochrome O ubiquinol oxidase {ECO:0000313|EMBL:KJA11923.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
ubiquinol oxidase subunit II
scn_reactorb_scaffold_19788_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21298..22641
DNA (1344bp) protein (448aa)
General substrate transporter n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAH9_ALIDK
Arabinose ABC transporter permease {ECO:0000313|EMBL:KJA11924.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
general substrate transporter
scn_reactorb_scaffold_19788_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22747..23712)
DNA (966bp) protein (322aa)
Protein TolA n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ31_ALIDB
protein tola
Protein TolA {ECO:0000313|EMBL:ADU99740.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_19788_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23738..24166)
DNA (429bp) protein (143aa)
biopolymer transport protein ExbD/TolR id=12551109 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_19788_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24180..24881)
DNA (702bp) protein (234aa)
Protein TolQ n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBE3_ACIDE
Protein TolQ {ECO:0000313|EMBL:EER58205.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
protein tolq
scn_reactorb_scaffold_19788_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24878..25294)
DNA (417bp) protein (139aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I777_9BURK
tol-pal system-associated acyl-CoA thioesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_19788_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25311..26495)
DNA (1185bp) protein (395aa)
Aminotransferase class I and II n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBL8_ACIET
aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACM33697.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_19788_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26513..27061)
DNA (549bp) protein (183aa)
N utilization substance protein B homolog n=1 Tax=Acidovorax sp. NO-1 RepID=H0C187_9BURK
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
transcription antitermination factor nusb
scn_reactorb_scaffold_19788_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27058..27528)
DNA (471bp) protein (157aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=12551104 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_19788_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27535..28656)
DNA (1122bp) protein (374aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ38_ALIDB
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone {ECO:0000313|EMBL:GAO23596.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_19788_30
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28997..29290)
DNA (294bp) protein (98aa)
Ferredoxin n=1 Tax=Acidovorax sp. NO-1 RepID=H0C184_9BURK
Ferredoxin {ECO:0000313|EMBL:EHL21739.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
ferredoxin
Displaying items 1-30 of 34 in total

View Taxonomy