ggKbase home page

scn_reactorb_scaffold_41903_28

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(28865..29674)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 271.0
  • Bit_score: 479
  • Evalue 1.60e-132
tRNA pseudouridine synthase A n=2 Tax=Alicycliphilus denitrificans RepID=E8TYG9_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 271.0
  • Bit_score: 479
  • Evalue 1.10e-132
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 271.0
  • Bit_score: 479
  • Evalue 3.20e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCCCGAAAGCGCGGCCCGCATCGCCCTCGGCGTCAGCTACAACGGGCAGCGCTACAACGGCTGGCAAAGCCAGCCCTCGGGCCAGACCGTGCAAGACCACCTCGAAGCGGCCCTGGGCCGCTTCGCCACGCAAGAGGTGGCAACCCTGTGCGCCGGGCGCACCGACGCCGGGGTGCATGGCCTGATGCAGGTGGTGCATTTCGACACGCCCCTGCGGCGCACGCCGTTTTCCTGGGTGCGCGGCACCAACACCTTCCTGCCACCGGACATCGCGGTGCAATGGGCCCAGCCCGTGCCCAACGCCTTCCACGCGCGCGCCTGCGCCACGGCGCGGCGCTACGCCTATGTGCTGCTGCAGTCACCCGTGCGCCCGAGCGTGGAGTCCGGCCGCGTCGGCTGGGTGTTCCACCCGCTCGACGGCGACGCCATGCGCGCCGCCGCGCAGCACCTGCTGGGCGAACACGACTTCACGTCTTTCCGCGCCTCGGCCTGCCAAGCCAAGACCCCGGTCAAGACACTGCACCGCATCGGCATCACGCGGCGCGGTGAAGACGCGCACTGCTACTGGCGCTTCGAGTTCGAGGGCAACGCCTTCCTGCACCACATGGTGCGCAACATCATGGGCTGCCTGATCGCCGTGGGCCAGGGGCACAAGCCGGCGGGCTGGATGGCCGAAGTCCTGGCCGCGCGCTCGCGCGACGCCGCCGCGCCCACCTTCTCGCCGGACGGCCTGTATTTCCTCGGCCCGGTGTACGACCCGGCCTGGGGCCTGCCCACGCGTACGGCTGCGTATGATTGGCTGCCATGA
PROTEIN sequence
Length: 270
MPESAARIALGVSYNGQRYNGWQSQPSGQTVQDHLEAALGRFATQEVATLCAGRTDAGVHGLMQVVHFDTPLRRTPFSWVRGTNTFLPPDIAVQWAQPVPNAFHARACATARRYAYVLLQSPVRPSVESGRVGWVFHPLDGDAMRAAAQHLLGEHDFTSFRASACQAKTPVKTLHRIGITRRGEDAHCYWRFEFEGNAFLHHMVRNIMGCLIAVGQGHKPAGWMAEVLAARSRDAAAPTFSPDGLYFLGPVYDPAWGLPTRTAAYDWLP*