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scn_reactorb_scaffold_41903

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_41903_1
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137..553)
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YU21_9RHOO
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ENO83449.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
biopolymertransporter ExbD/TolR
scn_reactorb_scaffold_41903_2
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..1302)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036FC6B4
MotA/TolQ/ExbB proton channel
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
scn_reactorb_scaffold_41903_3
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1305..2069)
DNA (765bp) protein (255aa)
Putative TonB protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K327_AZOSB
tonB1; putative TonB protein
Putative TonB protein {ECO:0000313|EMBL:CAL93232.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scn_reactorb_scaffold_41903_4
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2082..2843)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000377B5E9
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACK52357.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scn_reactorb_scaffold_41903_5
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2869..3963)
DNA (1095bp) protein (365aa)
ABC transporter permease n=1 Tax=Methylocystis parvus RepID=UPI0003667394
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ACK52358.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scn_reactorb_scaffold_41903_6
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4043..4243
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P628_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI07233.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
scn_reactorb_scaffold_41903_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4331..5515)
DNA (1185bp) protein (395aa)
Possible periplasmic iron siderophore binding protein of ABC transporter n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7E9_RHOPA
ABC transporter periplasmic iron siderophore binding protein
Possible periplasmic iron siderophore binding protein of ABC transporter {ECO:0000313|EMBL:CAE27749.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
scn_reactorb_scaffold_41903_8
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5515..6585)
DNA (1071bp) protein (357aa)
Putative ATPase n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R2N8_NOCCG
putative ATPase
Putative ATPase {ECO:0000313|EMBL:CCF61888.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
scn_reactorb_scaffold_41903_9
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6640..9024)
DNA (2385bp) protein (795aa)
TonB-dependent siderophore receptor n=1 Tax=Pseudomonas syringae pv. lachrymans str. M301315 RepID=F3E9Y8_PSESL
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EGH82971.1}; TaxID=629260 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. lachrymans str. M301315.;"
TonB-dependent siderophore receptor
scn_reactorb_scaffold_41903_10
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9487..10548)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETK9_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52361.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scn_reactorb_scaffold_41903_11
unknown

Not on your lists

comp(10574..11584)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0003741DC8
scn_reactorb_scaffold_41903_12
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11669..14095)
DNA (2427bp) protein (809aa)
TonB-dependent siderophore receptor n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X943_METSD
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACT49663.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
scn_reactorb_scaffold_41903_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14308..14802)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036566DC
Uncharacterized protein {ECO:0000313|EMBL:KJA08929.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scn_reactorb_scaffold_41903_14
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14748..15179)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036566DC
Uncharacterized protein {ECO:0000313|EMBL:KJA08929.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
putative uncharacterized protein
scn_reactorb_scaffold_41903_15
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15160..16182)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KHL0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE53140.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scn_reactorb_scaffold_41903_16
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16461..17420)
DNA (960bp) protein (320aa)
Anti-FecI sigma factor, FecR n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X7E8_METSD
Uncharacterized protein {ECO:0000313|EMBL:KJK05761.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;"
anti-FecI sigma factor FecR
scn_reactorb_scaffold_41903_17
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17417..17947)
DNA (531bp) protein (177aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X7E9_METSD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT51414.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
scn_reactorb_scaffold_41903_18
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18028..18384)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI000361BD9F
ModE family transcriptional regulator
Tax=CG_Delta_02
scn_reactorb_scaffold_41903_19
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18502..20814
DNA (2313bp) protein (771aa)
malic enzyme (EC:1.1.1.40 2.3.1.8)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase {ECO:0000313|EMBL:ACM32510.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ACM32510.1};; EC=2.3.1.8 {ECO:0000313|EMBL:ACM32510.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W520_ACISJ
scn_reactorb_scaffold_41903_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21042..22070
DNA (1029bp) protein (343aa)
NitT/TauT family transport system substrate-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQC6_DELAC
NitT/TauT family transport system substrate-binding protein {ECO:0000313|EMBL:EPD41978.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
NMT1/THI5-like domain-containing protein
scn_reactorb_scaffold_41903_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22133..22969
DNA (837bp) protein (279aa)
nitrate ABC transporter ATP-binding protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F5DC3D
ABC transporter family protein {ECO:0000313|EMBL:KFJ10917.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
ABC transporter-like protein
scn_reactorb_scaffold_41903_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22993..23760
DNA (768bp) protein (256aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T850_ACIDE
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EER59352.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ABC transporter permease
scn_reactorb_scaffold_41903_23
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23825..25000)
DNA (1176bp) protein (392aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TSV9_ACIAC
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABM34047.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scn_reactorb_scaffold_41903_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25117..25989)
DNA (873bp) protein (291aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003732941
acetyl-CoA carboxylase, carboxyl transferase subunit beta
scn_reactorb_scaffold_41903_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26046..26855)
DNA (810bp) protein (270aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Tryptophan synthase alpha chain n=2 Tax=Alicycliphilus denitrificans RepID=E8TYH2_ALIDB
scn_reactorb_scaffold_41903_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26852..28132)
DNA (1281bp) protein (427aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EB412
scn_reactorb_scaffold_41903_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28110..28868)
DNA (759bp) protein (253aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'phosphoribosyl)anthranilate isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BV14_9BURK
scn_reactorb_scaffold_41903_28
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28865..29674)
DNA (810bp) protein (270aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
tRNA pseudouridine synthase A n=2 Tax=Alicycliphilus denitrificans RepID=E8TYG9_ALIDB
tRNA pseudouridine synthase A
scn_reactorb_scaffold_41903_29
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29674..32370)
DNA (2697bp) protein (899aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BV12_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23768.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scn_reactorb_scaffold_41903_30
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32698..33810)
DNA (1113bp) protein (371aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Comamonas testosteroni S44 RepID=D8D461_COMTE
aspartate-semialdehyde dehydrogenase
Displaying items 1-30 of 55 in total

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