ggKbase home page

scn_reactorb_scaffold_142208_8

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 7197..7676

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIC1_METAL similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 133.0
  • Bit_score: 184
  • Evalue 4.40e-44
Uncharacterized protein {ECO:0000313|EMBL:CDS51209.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 135.0
  • Bit_score: 224
  • Evalue 9.20e-56
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 135.0
  • Bit_score: 190
  • Evalue 3.00e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polaromonas sp. CG9_12 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAACCAAAAGTCTCTGTCAGTTCATTTGAAAACCTACTTTAGGTTCATGAACGAGAAAATCGAGTTTGGCCAGCGGCTGCGAACCGCCATGGCCGAGGCGGGCTACCCGCTGCGGCCGGTGGTGCTTGAGCGTGAATTCAACACGCGGTACTGGGGGCGCTCCGTGACCTTGCAGGCGGCGCGCCGCTGGCTGCGCGGCGAGGCGATTCCGGCGCAGGACAAGGTGCAGGTCCTGGCCGAGTGGCTGAAGATCGAGCCCGAGGTGCTGCGCTTTGGCGAGGCGGTGCGCCTGTCGGTGCAGGAGCAGCGCAAGCGCTGGGATGACGGGGTGGGCTACCTGGAGCGCGAGGCCTTCGACGCTTTCCTGCAACTGCCCGCGCCGCAGCGCAAGGTCGTGCGGGAGGTCATCCTCACGTTTGCCAAGGTGCACTGCGGCGCCGCGCCCGGCGAAGGGCCGGCGCCCGATGGCGCGCCGTAG
PROTEIN sequence
Length: 160
MNQKSLSVHLKTYFRFMNEKIEFGQRLRTAMAEAGYPLRPVVLEREFNTRYWGRSVTLQAARRWLRGEAIPAQDKVQVLAEWLKIEPEVLRFGEAVRLSVQEQRKRWDDGVGYLEREAFDAFLQLPAPQRKVVREVILTFAKVHCGAAPGEGPAPDGAP*